Results - Acr-Aca DB

Anti-CRISPR Results - GCF_900205745.1 (Total 4 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_021350213.1	553825	554145	+	107	-1.5	5.6283	WP_118219685.1\|HTH_24-0-AcrIIA7\|36.6\|1e-11	0.215858058	36	-1.7084045	Not found in Prophage	Not found in Prophage	PHAGE_Lactob_Lj928_NC_005354-gi\|41179318\|ref\|NP_958536.1\|\|2.06e-36	-	MGSNDFFTVAYKILSYLKYCYEHGEQPDPGVINERTLLISKAQYVETLRMLSDHNYIEGVTFTHTKEGVLYSFQDARITIEGLEYLAENSMMQKAFRIFKSFKEWL	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 1	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_057194581.1	554189	554380	+	64	-5	4.4341	Acr	0.503999623	84	-2.623676	Not found in Prophage	Not found in Prophage	-	-	MAQDAFEYRIEIDSEGVDEAIEKVDVLNDHLKQTIELVDQLNLKGVEVRLESKPYGLWHRLFK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 2	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_104878425.1	1469128	1469634	+	169	10.5	10.2961	Acr	0.052268244	1168	-5.3747606	Not found in Prophage	Not found in Prophage	-	-	MLNPLVAKNRITTGSRLRKNDKRDARRLAVTEFMEHQKPYLLAYKQDPIYRELTDMNRYYDQLNEDKKRARNRAHRVLQLVFASFGASKGGFDFDTKLSWELLVLFPHANIVREIGDLNELENQILAAHFQGVGPKRAHDGTRKVLTSVQTPSNDSRNWWQYSYPTNQ	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 2	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_087717460.1	1469543	1469917	+	125	11.5	11.1373	Acr	0.124434	1089	-5.2965903	152	-5.2965903	PHAGE_Bacill_PfEFR_5_NC_031055-gi\|100021\|ref\|YP_009285265.1\|\|5.88e-13	-	MTELGKSLPAFKLLQTIPGIGGSTAIRLISELGDMRRFNTRQQLNSYVGIDTTEVDSGDHQSARHITKHGNPHARRILYWTVILMINPKMGNNHIRDAYQKPLPRRRNSSSVKWIASSKQSDTL	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 2	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_003688751.1	1470007	1470294	+	96	4.5	9.7526	AcrIIA7-2-WP_099963114.1\|HTH_23\|34.0\|0.00022	0.14250774	85	-2.6336672	14	-2.6336672	PHAGE_Shigel_Sf6_NC_005344-gi\|41057344\|ref\|NP_958230.1\|\|5.85e-07	-	MTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 3	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_003684094.1	1605948	1606496	-	183	7	7.677	WP_113712963.1\|HTH_20-0-AcrIIA15\|37.8\|0.004	0.084817719	1179	-5.3854265	Not found in Prophage	Not found in Prophage	-	-	MTEINDQELMHKLMKTVKGLHKRVHGSGPMGGKCHHHEHGPNGQGCPMHGGMGPGMMMGRHHMPPFAKPGLGHGHSREHLLVLIGKHPDGIRQKELAEGFGINQSSTSELVSKLEDDGYLKREVDPKDKRATLLFLTDLGKARAAEVEDAQKTMFEGLFKNLTAEEKQTFGDLLDKIRGDQN	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 3	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_104878499.1	1606592	1606918	-	109	8.5	9.9862	Acr	0.1549861	835	-5.0110517	Not found in Prophage	Not found in Prophage	PHAGE_Vibrio_VP4B_NC_042136-gi\|100066\|ref\|YP_009626042.1\|\|9.40e-05	-	MRQMLSFIDDHYQERLNLTEIAHAAHVGRSECSRCFQKTLATLPMRYLQEYRLEKAAKLLTTTPLPISVIANQVGFGAGPFFSQCFKRRTGVPPASTESGVPKCKLLR	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 3	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_104878500.1	1606925	1607479	-	185	5	8.1189	Acr	0.081690852	1470	-5.6546474	Not found in Prophage	Not found in Prophage	-	-	MPNYINSVNLRENSDFPYLVLDVVDRHPTPRNPGFHVFHWHHDLQLLYVLVGRVRVQTLAETVTLTTGQGCLIKPEVIHRIEGAPESHYRSFVFPVTMVTFYPGSPAKRLVAETLTTTERLILPFLNDQDWTKKVNGLLRGLNELEQSKGAPLYPYQVLTTLAQLWLVIEEHLPTKKLVKPTIA	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 4	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_027821367.1	1768396	1768599	+	68	2	9.8665	WP_084840020.1\|HTH_XRE\|AcrIIA1\|46.7\|2.2e-12	0.147826803	452	-4.373309	Not found in Prophage	Not found in Prophage	PHAGE_Brevib_Abouo_NC_029029-gi\|971767218\|ref\|YP_009220108.1\|\|5.87e-09	-	MKNTIATRRKQRKLSQAELAQLTAVTRQTINAIENNKYDPSLSLAFKLAAILETTVDELFSNGEDVK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum
Acr-Aca 4	Low Confidence	Lactobacillus fermentum	NZ_LT906621.1	WP_027821368.1	1768596	1769030	+	145	6.5	9.5837	Acr	0.501394157	1118	-5.324603	Not found in Prophage	Not found in Prophage	-	-	MSRAKRILRFTFWVNNLVFLLLAALIIVSFSHLFYIWAPIISLVLVVTCVAMLWYMRHQLGVKSFKGLYWVDDERDRLITLKVHSTVMVSATYFLYGLLGIICLLLNWRLSSQELGQTLLAIIWLALVASNLQYYWLWIKYDQE	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus fermentum

Showing 1 to 10 of 10 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_900205745.1	NZ_LT906621	NZ_LT906621_1[848471;849761] (evidence-level=4), NZ_LT906621_2[1294238;1296954] (evidence-level=4),	2	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIIA[842242;848442], CAS-TypeIE[1296984;1306266],	2	CAS-TypeIE (n=1), CAS-TypeIIA (n=1),

Showing 1 to 1 of 1 entries