Results - Acr-Aca DB

Anti-CRISPR Results - GCF_900476435.1 (Total 3 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353000.1	2879487	2879846	-	120	10	9.9838	Acr	0.350353276	879	-4.487561	Not found in Prophage	Not found in Prophage	-	-	MQHDAQHVVLMNIKNLRKELKVWGRYWSRQELGQGYASRSACDRLKEPFTPSRCGGSRNHLPPDHINSYDMKVYTLAIDCRRALRAQYICNGQWQLIGFDSKKTFLFWLRRAEMALFGE	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 1	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353001.1	2879836	2880054	-	73	2.5	8.9642	AcrIIA3-0-3300010369_____Ga0136643_10000412_63\|HTH_3\|34.1\|3.5e-05	0.422768358	172	-2.9895	Not found in Prophage	Not found in Prophage	PHAGE_Lactoc_28201_NC_031013-gi\|100005\|ref\|YP_009279476.1\|\|1.08e-05	-	MKKKGADLLKAGRTIRGFTQDEVAQIYGISSKTYGSWERGRTAVSYDDLSAIFDQVFRLPLDKVTEVACHAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 2	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353010.1	2885549	2885878	+	110	7.5	9.2035	Acr	0.258899537	282	-3.457856	Not found in Prophage	Not found in Prophage	-	-	MILTKTPNTGKQHTEFRMLISIRFACLLSSTPNPMDCPRVQKRLAELNHYLRYNQASSLFYRSYCNQAGELGQTFALKVQDEQTATVYRMDKSVQQNVHHLCTHAVLIS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 2	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353011.1	2885891	2886136	+	82	5	10.2015	Acr	0.631899617	344	-3.6273904	Not found in Prophage	Not found in Prophage	-	-	MNSFEKLKNHHDQLRSEVDITPFFEWYDTRIALWQRDIIDQPQHAASFRQLIKADREAKQRMIEKHSALQIRVSIQLKQGK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 2	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353012.1	2886138	2886578	+	147	-7	4.5556	Acr	0.566534124	1301	-4.8693557	Not found in Prophage	Not found in Prophage	-	-	MSRPTLNQAMKLEAANKTAQNLNHDDVTPEQIAKHYDLHMDGFELAKVLERDCDHDLTFDDVEVLEQMSGYASDVLRNAEKQWVIDNDIQPPLAIGTKTTQGTITGIYQYGAAKYLVKPYGQSDEVCGTKRLVINFENAFAREVAT	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 2	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112354160.1	2886719	2887111	+	131	9.5	10.4365	Acr	0.203978278	401	-3.7428555	Not found in Prophage	Not found in Prophage	PHAGE_Bacill_SPbeta_NC_001884-gi\|9630241\|ref\|NP_046668.1\|\|4.10e-07	-	MITARVEHANALIKVISEHGRKFFDYNGRIATLELDKNGKVWFVDEYTQRRIYTHYSGRWAGFNNGGTLRSLIESMRTYITKGYQLPLGWIAPTRRNPANGDIWGYGQDAAAAVRKAAATLPIIQTGGKA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 2	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353013.1	2887108	2887638	+	177	-17	4.1192	Acr	0.293465545	150	-2.845366	Not found in Prophage	Not found in Prophage	PHAGE_Lister_A500_NC_009810-gi\|157325012\|ref\|YP_001468438.1\|\|1.28e-06	-	MSQSIIPPAFLLEMSQQLNTQNNRITADPIFMVCYDKWLTSSNDRGDKTIFLVIDDEHYEYAEFSEVVSHMAEYHEEWAATRCSDDEEDELSESLTEDNFEFVTLPEGVTIERVEMQKNMEVVKACLTEADAKAFIARKQHDYAPLYTYAFSMCFTPQMIELRKWIMSLTKSEVAS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 2	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353014.1	2887635	2887958	+	108	3	9.4884	AcrIE2-0-WP_109422150.1\|HTH_23\|32.8\|0.00072	0.460746328	693	-4.260331	Not found in Prophage	Not found in Prophage	PHAGE_Shewan_1/44_NC_025463-gi\|712915935\|ref\|YP_009103716.1\|\|1.47e-05	-	MNYLLPGGEQPKRLQLLLKLTKITSEPQIAALTEHYVNGLPAERAAARFMIETSNLSRAQAKLEKVASIVEQIKELDWSTLNSQPSANANSHKSYQLTDAVKQDGAK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 3	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353868.1	4150169	4150519	+	117	7.5	10.241	Acr	0.168485353	584	-4.1010356	Not found in Prophage	Not found in Prophage	PHAGE_Shigel_Stx_NC_029120-gi\|985761269\|ref\|YP_009226854.1\|\|5.96e-05	-	MKKINFYTSEDGKCPISDFLDSLSGKQVQKIAWVLQLIEELDVIPTTYLKKLTNTDGIWEVRIIVSGNIFRLLGFFDGDNLVVLNHGFQKKTQKTPAKEIKVAEKRRKDYLLRKRS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica
Acr-Aca 3	Low Confidence	Shewanella benthica	NZ_LS483452.1	WP_112353869.1	4150516	4150791	+	92	1.5	7.3169	WP_035079537.1\|HTH_3\|AcrIIA15\|46.7\|3.3e-12	0.123681975	363	-3.6679525	Not found in Prophage	Not found in Prophage	PHAGE_Entero_N15_NC_001901-gi\|9630515\|ref\|NP_046944.1\|\|1.25e-09	-	MSDFQKYLAKRKEVDSELTDNYDEGYQSFKFGVLLKEARKDAGLTQLELASKLHTQKSAISRIENHSEDVKLSTLERFASALGKKLEIHLV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella benthica

Showing 1 to 10 of 10 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_900476435.1	NZ_LS483452	NZ_LS483452_1[1307049;1307122] (evidence-level=1), NZ_LS483452_2[1865764;1865850] (evidence-level=1), NZ_LS483452_3[2175629;2175705] (evidence-level=1), NZ_LS483452_4[2286820;2286925] (evidence-level=1), NZ_LS483452_5[2292880;2292960] (evidence-level=1), NZ_LS483452_6[2613178;2613256] (evidence-level=1), NZ_LS483452_7[2650542;2650692] (evidence-level=1), NZ_LS483452_8[2833714;2833799] (evidence-level=1), NZ_LS483452_9[2954218;2954325] (evidence-level=1), NZ_LS483452_10[2981494;2981585] (evidence-level=1), NZ_LS483452_11[2986933;2987041] (evidence-level=1), NZ_LS483452_12[3150298;3150399] (evidence-level=1), NZ_LS483452_13[3367684;3367819] (evidence-level=1), NZ_LS483452_14[3382841;3382945] (evidence-level=1), NZ_LS483452_15[3418991;3419081] (evidence-level=1), NZ_LS483452_16[3562886;3570474] (evidence-level=4), NZ_LS483452_17[3868218;3868371] (evidence-level=1), NZ_LS483452_18[4008063;4008170] (evidence-level=1), NZ_LS483452_19[4175932;4176017] (evidence-level=1),	19	Nb_arrays_evidence-level_1=18,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIF[3570605;3577064],	1	CAS-TypeIF (n=1),

Showing 1 to 1 of 1 entries