Results - Acr-Aca DB

Anti-CRISPR Results - GCF_000013345.1 (Total 9 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_035729273.1	49596	50174	+	193	-2.5	4.8486	Acr	0.129009782	3759	-5.8892736	Not found in Prophage	Not found in Prophage	-	-	MSGSTAGPSPAPSATTGPPPGASQAPGPPLATASAPPTGEVDRKDPSAVAADCFTRWQSFDARTDPGPAAGVERARDCLTEDFAASLGAGGAGAGGSGTAAGGDGQAWQEVRAAGTHSRVTVLATTPLGGIDTTATGRVVLQLNVRRETAAGGAAPVVTLSTPALTLLRQTDGTWRVAGADLSSVAGDAPGR	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 1	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_035729276.1	49304	49489	+	62	1.5	8.9971	AcrIIA7-3-3300001356_____JGI12269J14319_10000030_160\|HTH_17\|32.7\|1.6e-06	0.151108369	97	-3.4477587	Not found in Prophage	Not found in Prophage	PHAGE_Bacill_SPP1_NC_004166-gi\|22855124\|ref\|NP_690730.1\|\|0.001	-	MPSRPSDDDEVLTVDELVAWLRLSESTVLKLLSERAIPARKVGHQWRVRRGRVRDWLDGRE	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 2	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011434602.1	157063	157398	+	112	3.5	8.7105	3300014720_____Ga0172376_10002690_28\|HTH_3\|AcrIIA15\|37.1\|6e-09	0.106959854	855	-5.11303	37	-5.11303	PHAGE_Pseudo_phi297_NC_016762-gi\|374531272\|ref\|YP_005098055.1\|\|3.26e-08	-	MTIEPAYQEFGERLAQTRRHASLTQRDVAERSGISRPTIANIEKGRQRLLYHQLLDLAHAIGVDPRDLLPAPPTPSPALAHLDDLAPPAHVLDWVRRGVDRTGRQDRGEQR	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 2	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011434603.1	157382	157909	+	176	-0.5	6.3385	Acr	0.100200193	1065	-5.2646136	45	-5.2646136	PHAGE_Clostr_c_st_NC_007581-gi\|80159810\|ref\|YP_398554.1\|\|1.66e-14	-	MASNAERAAHDLLARHAVAAPPVPVDKIAAAEGISVVQEPFRDDEVSGVLLREPDRTMIIVNAANAVVRQRFTIAHEIGHFTLHRGTVYLDGRARVNFRDGLSSMATDQEEIEANSFAAALLMPTKWVRTAFETTVRNSPVGSEEELAGLLAGRFVVSRQAMLFRLIYLGLIAAP	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 3	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011435334.1	1027311	1027859	-	183	2	7.3605	Acr	0.10688302	483	-4.73046	23	-4.73046	PHAGE_Mycoba_Che9c_NC_004683-gi\|29566141\|ref\|NP_817710.1\|\|4.52e-15	-	MNPPIRRTSSEIRAIELLKDCGYANYIPVPVDRIAASLRAVVRYQPFEADDISGLLLRQDGQPAIIGVNSVNAPVRQRFTIAHEIGHLLLHEGKGLILDRLVRVNFRDAVSSTATDRQEREANAFAAALLMPDERIVEQLDQLTSGRLRSDTAIVQHLARTFDVSRQAMEFRLINLGLLSPA	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 3	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_082456855.1	1027856	1028215	-	120	0.5	6.7264	WP_125287543.1\|HTH_3\|AcrIIA15\|36.8\|1.4e-06	0.114608798	2403	-5.6922264	Not found in Prophage	Not found in Prophage	PHAGE_Thermo_THSA_485A_NC_018264-gi\|397912660\|ref\|YP_006546324.1\|\|4.78e-06	-	MRPVQDVELQRGLAQSVRKHRRQRGWSQAALAERLGLTRTTITNIEHGAQGITLLTFVRLAEQLNVGAPELLAEVIAGRPAPSAAPEAPGPYREWVASIASMPGDDNVSAHVADDGNTS	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 4	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011435641.1	1429640	1430074	+	145	6.5	10.8022	Acr	0.303737514	4037	-5.936976	Not found in Prophage	Not found in Prophage	-	-	MSIPALEHAAPPAGGVPVPAGYPAGDVAAALRWLAAEALRLHDLVVNAADAVPASAVGELGLTASDVRRLCEDRKWSTGRLIVELRRAAGRRGVRLPDNDSVKRTVRRWRNGHTAGLSPFYADLLSDVFGSAFTSRPPLQAVAR	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 4	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011435642.1	1430071	1430379	+	103	10	10.8795	3300017963_____Ga0180437_10001802_15\|HTH_24\|AcrVA3\|37.0\|3.5e-05	0.146165884	1478	-5.4589486	Not found in Prophage	Not found in Prophage	PHAGE_Strept_TG1_NC_018853-gi\|410491937\|ref\|YP_006907205.1\|\|2.69e-12	-	MSVGNPSTRRHLFAAFGGRCGYCLTAAADHLDHLVPRAAGGTNSRFNLIPACTPCGTSKGALSVAEWVARRAAGTLTTGAGAPPVPVYRVPMKPVNHRPIAA	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 5	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011435982.1	1852815	1853285	-	157	9	10.959	WP_119379710.1\|HTH_7-0-AcrIIA7\|40.0\|1.4e-08	0.099889104	1773	-5.5513873	Not found in Prophage	Not found in Prophage	-	-	MGPVASDSIPMQVRLHRTMTPAGFDHAPGPFVADGQPPDSRTQRERVRLAQIELLELSAQMTAPHLRRQILHIYSLLRNEPVVTPGPPKPPPFRLTLREMEVLTLVATGCSNVEAAEHLTIRAETVKTYMRSIMRKMGVRNRTAAVHAARQSGLLD	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 5	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011435981.1	1852543	1852788	-	82	0	6.4519	Acr	0.320830755	458	-4.6795444	Not found in Prophage	Not found in Prophage	-	-	MDPGGAGARGSSAYGHPNAAVRSAALSWRSTEQQAYAPLRTTWSTAAGELTEDILALKTAVHDSNGSFQQTEQAITRTFTV	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 6	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011436677.1	2643466	2643864	+	133	5	11.4629	Acr	0.118585077	1706	-5.529549	77	-5.529549	-	-	MTSASPSYPESGLLARLRADGFVRRDLLALVPLGGAGLGVAYRPRAASAPTVSGGTGREDTDGREGADSPEGLKGRDGPRGAGGAVAPGVVRLAVPLAGAGQAARVLAGIEALLAPRWVWWSARSATRVPLA	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 6	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011436678.1	2643825	2644376	+	184	3.5	9.8694	WP_000690626.1\|HTH_7-3-AcrIIA14\|39.2\|2.3e-27	0.067859425	1530	-5.473306	67	-5.473306	PHAGE_Salmon_SJ46_NC_031129-gi\|100061\|ref\|YP_009293518.1\|\|8.93e-58	-	MVGAVRDARAARLDGVEAERLFTDKASGKDADRPKLDEMLAFVREGDTVLVHSMDRLARNLDDLRRIVRTLTAKGVRVEFVKEGLTFIGEDSPMATLLLSVMGAFAEFERALILERRREGIAAAKQRGAYTGRKPALTPGQARDLVARAAAGEQKSDLAREFGVSRETVYSYLRATETAAAAG	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 7	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011436694.1	2661290	2661757	+	156	4.5	10.6459	Acr	0.330267255	3661	-5.8777127	Not found in Prophage	Not found in Prophage	-	-	MTSKLDFMESRLYIHAMTDDMTDETRRDNVTRAARRAIFLDGLPVATLGGIALALGSGPDQTAAQKAWWLGASGAFTLAVAWVLLRAFRRADEYQRKIQVESMAITFAAVLVGLQLAALLDAAGIVQLRQLTQIITIGGVAMWLLIADLRTRLRR	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 7	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011436695.1	2661754	2661978	+	75	2	9.1227	AcrIIA1-1-WP_074911965.1\|HTH_3\|48.3\|1.4e-11	0.147761686	332	-4.4101677	Not found in Prophage	Not found in Prophage	PHAGE_Flavob_23T_NC_041859-gi\|100025\|ref\|YP_009592333.1\|\|1.51e-06	-	MKNRLRVLRAERRWSQAYLADRCRVSRQTINAIETERYDPSLLLAFTLADIFSLAIEEIFIPDRSGTTTATDRP	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 8	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011437123.1	3222650	3222922	+	91	7	10.9228	AcrVA5-2-WP_087920907.1\|HTH_Tnp_1\|33.3\|0.00011	0.132856425	652	-4.9399533	Not found in Prophage	Not found in Prophage	PHAGE_Shigel_Sf6_NC_005344-gi\|41057344\|ref\|NP_958230.1\|\|0.001	-	MGATRRGFTEEYKEQAVAFVIDGSRPVAEVARNIGVHEMTLGKWVKKAKDVESGDRHWLRRLGWARDLPVMTVFAPACPTWSATTRRSRT	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 8	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_049760933.1	3222962	3223276	+	105	9	11.9037	WP_113653112.1\|HTH_3\|AcrIIA15\|30.6\|1.1e-06	0.099640839	438	-4.637789	Not found in Prophage	Not found in Prophage	PHAGE_Thermo_THSA_485A_NC_018264-gi\|397912660\|ref\|YP_006546324.1\|\|5.59e-05	-	MVGDRASHATPLSVARSLRLLGEHVSTWRKLNRLTAAQVAQRAGISRDTLRAIEQGKGTASTENLFRVLRTIGIMDAVVRATDPYETDVGRLRMDEILPKRVRR	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 9	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011438387.1	4804477	4804851	+	125	-2	5.2802	WP_073207466.1\|HTH_3\|AcrIIA15\|52.0\|0.00041	0.216207209	962	-5.1926255	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_CNPx_NC_031241-gi\|100036\|ref\|YP_009302054.1\|\|0.002	-	MAKTRVDVNGLYGALDAARTARGLSWRQLAKEIEVSPSTMTRLANGHKPEVDAFVAMTRWLGMPAERFMLDDGDDERPQPELVAELAPLLRARKDLDAEDVRHLQEIIGSAVRRFNADRDARET	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae
Acr-Aca 9	Medium Confidence	Frankia casuarinae	NC_007777.1	WP_011438388.1	4804852	4805436	+	195	2	7.0534	Acr	0.079211727	78	-3.285386	Not found in Prophage	Not found in Prophage	PHAGE_Bacill_phi4J1_NC_029008-gi\|971821577\|ref\|YP_009218160.1\|\|0.005	-	MARPGWNQAKMRALAAEIRVEMGIGSFDRLDPYRIAEEYRVPVYPLQELGDHRGQCSEAAIAHFTVTRRTKWSAALVAAGSNRMIIENAAHEEVRRRSNLAHEISHLLLEHEFDTLLLTDDTTCFTDEKKEKEAQFLARELLISEQAAKQAAFKRLTNEEVGALYDVSSQFAQWRMSGPRVYAQRSLARQNGTS	No		Bacteria; Actinobacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; Frankia casuarinae

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_000013345.1	NC_007777	NC_007777_1[32161;34505] (evidence-level=4), NC_007777_2[382720;382806] (evidence-level=1), NC_007777_3[702503;702636] (evidence-level=1), NC_007777_4[1713659;1713766] (evidence-level=1), NC_007777_5[2634572;2634683] (evidence-level=1), NC_007777_6[2855608;2855692] (evidence-level=1), NC_007777_7[3232705;3232791] (evidence-level=1), NC_007777_8[3904716;3905896] (evidence-level=4), NC_007777_9[3971225;3972714] (evidence-level=4), NC_007777_10[4015472;4015653] (evidence-level=1), NC_007777_11[4056539;4056625] (evidence-level=1), NC_007777_12[4110195;4110283] (evidence-level=1),	12	Nb_arrays_evidence-level_1=9,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=3	CAS-TypeIE[22464;32142], CAS-TypeIC[3963334;3971091],	2	CAS-TypeIC (n=1), CAS-TypeIE (n=1),