Anti-CRISPR Results - GCF_000087965.2 (Total 3 loci with Aca homologs)

1. Guilt-by-Association

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1.1 Guilt-by-Association (Tabular View)

Loci ID Classification Organism Refseq ID Protein ID Start End Strand aa Length Charge Isoelectric Point Acr/Aca PaCRISPR_score AcRanker Rank AcRanker Score AcRanker Rank ProphageAcRanker Score Prophage MGE/Propahge Metadata Acr_Hit sequence Self Target w/in 5000 BP Self Target Outside 5000 BP lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1Medium Confidence Xanthomonas albilineans GPE PC73NC_013722.1WP_045756969.128186612818915-859.510.7732Acr0.144385686383-4.612366Not found in ProphageNot found in ProphagePROPHAGE_Xantho_33913-gi|21231081|ref|NP_636998.1||3.34e-36-MRELIAISERRACRLAGLSRDAFGHEPEPAPATQVLSARLVELAQTYRRFGYRRLHDVLRPEFPRVNHKKVYRLYCRLPAKPEINo
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
Acr-Aca 1Medium Confidence Xanthomonas albilineans GPE PC73NC_013722.1WP_012916841.128189482819151-680.56.9473WP_056710949.1|HTH_17|AcrIIA14|44.8|6.5e-110.15389958112-3.64791359-3.6479135PROPHAGE_Xantho_33913-gi|21230912|ref|NP_636829.1||7.85e-37-MAVAELSRQYGFSPASFYQWCSKYGGMEAEDARCLKDLETENQRLKRLLAEAHLDIEALKVGFGVKRNo
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
Acr-Aca 2Medium Confidence Xanthomonas albilineans GPE PC73NC_013722.1WP_012916966.129616812962052+12449.5499Acr0.2383970741679-5.654087Not found in ProphageNot found in Prophage--MAKAYLWFNAALYALLALWCTIWPASTAVAVGYVGLDRSGQSEYLVIYGGLQWGMAFLFGYFAQSGQLRNGLLLALAFYVPIVLYRSASLLRLWPVGATTTGLAAFEILLLLAAVALWYKQRINo
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
Acr-Aca 2Medium Confidence Xanthomonas albilineans GPE PC73NC_013722.1WP_012916967.129621112962668+186-1.55.436WP_095590313.1|HTH_23-0-AcrIF6|30.4|1e-130.137821836347-4.5418215Not found in ProphageNot found in ProphagePHAGE_Rhizob_vB_RleM_P10VF_NC_025429-gi|712913000|ref|YP_009099832.1||3.77e-07-MTETPDHDETGQLLLATAAGDSAAFERLYRTTSPRLFGVCLRIVPQRGEAEDVLQEVFSAVWRKATQFDPQRARGLTWLTMIARNKAIDYLRARAPARQSVALDEAGELPEDGRDPLAETEWRVAGRRLDVCMGELEPPRGELIRTAFFEGITYEELANRSGTPLGTVKSWIRRSLAKLKACLEQNo
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
Acr-Aca 3Medium Confidence Xanthomonas albilineans GPE PC73NC_017555.1WP_014607042.159486514+1891210.6587WP_000690626.1|HTH_7-3-AcrIIA14|46.7|1.2e-430.0728443741062-5.391192Not found in ProphageNot found in ProphagePHAGE_Burkho_KS14_NC_015273-gi|327198275|ref|YP_004306850.1||4.48e-75-MRIGYARVSTDDQNLDLQRDALCGAGCIEIYEETASGRRADRPELAQCLRALRAGDTLVVWRLDRLGRSLADLVGIVEGLRHRGVGFESLNERIDTTHAAGEMIFHVFAMLAQYERSLIRERTRAGLAAARARGRKGGRAAKLDTRQIREIRALLRDPEVRVTDVAKRYSVSRATLYKHVGAVRATNQNo
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
Acr-Aca 3Medium Confidence Xanthomonas albilineans GPE PC73NC_017555.1WP_014607043.165546967+1380.56.7375Acr0.37536531347-3.0278542Not found in ProphageNot found in Prophage--MTDKNEDNRHKALMTALEKVQTALEALALLKLADEFYTKEERAKVYAEYDRLRDVDQAAYENLDKARDKARAADDLTWEQRVEKYGEVKARELAAPYHAAMDARRESSLAVMAFQKEHRIVLRLLDMRATLSKGRYDNo
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
Acr-Aca 3Medium Confidence Xanthomonas albilineans GPE PC73NC_017555.1WP_045756623.170077255+833.510.2229Acr0.2534926781747-5.671489Not found in ProphageNot found in Prophage--MIPEIALYFAIAVITITAIAHLMLGRIIRAVESAANSTPPNLRGVSREEALVKVEQWRKQQRTLWTLGIVVALGPFVLAWLCNo
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

GCF NC ID Start End Strand Protein ID aa Length PaCRISPR_score AcRanker Rank AcRanker Score AcRanker Rank ProphageAcRanker Score Prophage Acr_Hit|pident sequence lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_000087965.2NC_013722.1265340265717+WP_012914795.11260.79463340344-3.000457Not found in ProphageNot found in ProphageAcrIF12|46.3MNYMKKWIREHVAEVIKANELSRWVDDSDMKFAMYVVECGQGAQLAQDVGREIGNETIVAIAQTVIDTIDEVSRGGTPRTRSRRKITDKQRHVLAVVLLEKYGTARGIAAAGWGLTDEEIDNADVBacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
GCF_000087965.2NC_013722.1265710266282+WP_012914796.11910.3808596091104-5.422141Not found in ProphageNot found in Prophage---MSDDLDFSELSDDQIVELAVALAREAMRRNPALQAAFAQALLDERERVEAAARGSARVKQAAAQRLEQDAERAELAAERERRRQRIHGALVAYLARLAEIIGRPLGELTLVWKPKDYGRGPGPRLQVNQGATGADVRWHLLDFVAVDERLYTSPGLRSRQTELLPWFREVAAVANAFGLVHTFVVKGIEABacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
GCF_000087965.2NC_013722.1266279266866+WP_045756667.11960.2320988172498-5.852973Not found in ProphageNot found in Prophage---MTKELTNPLQALVKKATQTLPATTGKTAIQQAKLDRRAGTTVILADVSGSMESVAEDGRRKIDILRDAVDAARGPARLIAFSRTAREVEQIPEPESNTDLVAGLALAKSLDPGTTLLISDGEPDNEAAALALARTYRGAIDVLYIGSADNFRAIDFMRRLASAAGGGVTLNDITARDGARLLQQRIAGLLSGPQABacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
GCF_000087965.2NC_013722.1266863267306+WP_012914798.11480.571625067256-4.288549Not found in ProphageNot found in Prophage---MSRYLIWLVLNDGVSERVSERDIDASEEAGVIDRVLIPLMRGEQGRLGGRNSPYSVTGAVSGKRALARLWDEESPLADIGVCLHSRAAPCLWAELHADDCGGLADINQPADAPWCAVRCYAPEQVLPTWFDSWTKTLAMALVRRDGWBacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans
GCF_000087965.2NC_013722.1267440267883+WP_012914799.11480.12750235479-3.4141011Not found in ProphageNot found in Prophage---MAWYTLTYACGHTEQKQLYGKTSERERIINSAQSYDCPACRLAAAKAIEADIGLPPLTGSDKQIAWAAGIRAKAQSSLVAFESELDARWDSLDDKQKAASAQSLAAMMDAIRTIRRQTQAGWWIDHKNFGARDMVGMICRGQDLDCRBacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas albilineans

3. CRISPRCasFinder Summary

GCF NC_ID CRISPR arrays Nb CRISPRs Evidence levels Cas clusters Nb Cas Cas Types/ Subtyes
GCF_000087965.2NC_013722NC_013722_1[334616;334758] (evidence-level=1), NC_013722_2[2852458;2852604] (evidence-level=1), NC_013722_3[3116522;3116668] (evidence-level=1), NC_013722_4[3423446;3425663] (evidence-level=4), NC_013722_5[3608283;3608420] (evidence-level=1), NC_013722_6[3612886;3614293] (evidence-level=4),6Nb_arrays_evidence-level_1=4,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2CAS-TypeIC[3407522;3423257], CAS-TypeIF[3603884;3612756],2CAS-TypeIC (n=1), CAS-TypeIF (n=1),