Anti-CRISPR Results - GCF_000143985.1 (Total 7 loci with Aca homologs)

1. Guilt-by-Association

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1.1 Guilt-by-Association (Tabular View)

Loci ID Classification Organism Refseq ID Protein ID Start End Strand aa Length Charge Isoelectric Point Acr/Aca PaCRISPR_score AcRanker Rank AcRanker Score AcRanker Rank ProphageAcRanker Score Prophage MGE/Propahge Metadata Acr_Hit sequence Self Target w/in 5000 BP Self Target Outside 5000 BP lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1High Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_041866037.121283492128567+73510.467Acr0.570842716626-3.8119245Not found in ProphageNot found in Prophage--MKVAKRQQDSRYKVSIPFSEDERNRFVTFLESTGRKAGPYLKIEMMNRVREWEAIQSGKTQLNTKPFEKVGE
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 1High Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013254555.121286202128988+123-54.9467AcrIIA7-0-WP_106317108.1|HTH_DeoR|47.7|2.9e-060.5753034135-1.328461Not found in ProphageNot found in ProphagePHAGE_Gordon_Schwabeltier_NC_031255-gi|100041|ref|YP_009303424.1||1.24e-06-MNIDGRLEAMLEIIEQTLSEIKEREEHLAGVSHEIELATRDIEELRGITGSLAEIVESGKRIEWMTTTEVADELHVNKQTVRRWADTGLLRCYRIVKEGHRRFDRREIYEDVKRMGDEGNKQ
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 1High Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013254556.121290172129205+63-44.3623Acr0.63455346653-1.5600011Not found in ProphageNot found in Prophage--MALNEDNQQLITLINELDSSGYLIRKISERPSLCPVREFELLIEEKSKKDDLRGLSAAAIEG
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 2Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_083771525.123372512337481+776.510.6486Acr0.411347118174-2.5815449Not found in ProphageNot found in Prophage--MNRAKMEHKSPPAVKVNLTEDEIKRIDKGPLKATSGRGRATWVRNLITKELDRYESIQSGNTQLDSKPFNQNKEMKNo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 2Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013254752.123374782337723+8228.4581WP_013254752.1|HTH_17-1-AcrIIA7|100.0|1e-430.323194619259-2.9158914Not found in ProphageNot found in ProphagePHAGE_Brevib_Abouo_NC_029029-gi|971767221|ref|YP_009220111.1||4.03e-06-MTYMNQTEAAKYLHVSPSYVSNLTRQKMIPHKRIGGKVIYTKELLDRWILEDSLRSVGIDPKKSRLSDTVLGEEPSTTGDENo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 3Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013254754.123387342339270+179-25.38073300005611_____Ga0074647_1000046_77|HTH_Crp_2|AcrIIA7|44.8|7.9e-380.4232564781450-4.757082574-4.7570825PHAGE_Entero_Bp4_NC_024142-gi|640884689|ref|YP_009031998.1||4.49e-44AcrIIA7|41.9MELEEKESLQGFIGVKRIKARPMTRRGYNGYRGWQLPADENGDDEGMLVEYVDGGKSNHPAHEGYISWSPIDVFNRAYRPCDALTFGFAIEAAKAGEKIARKGWNGKGMFVFYQKGYPEGIPINKNTAEATRLPEGTVCKFRPYLMMKTAQNDFVPWVASQTDILAEDWEIIEQGEQKNo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 3Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013254755.123392672339521+85-25.5981Acr0.53371363102-2.0705915-2.070591--MSIETKEKAAPGKDTATENNHTNTTMIGFRQQELHEIEESLEEMDHKIQELFRFGTAHNRDIFAMKLSGEVRRIRDQLNEGRLMNo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 4High Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_041866073.126686042668852-83-15.0338WP_036858328.1|HTH_3|AcrIIA15|36.5|1.9e-050.681021256589-3.756896Not found in ProphageNot found in ProphagePHAGE_Strept_315.1_NC_004584-gi|28876151|ref|NP_795378.1||0.002-MLAVTIAQKKIIDYMEQQELSRADLARKIGVNKSTITRILNEGMIIDSRDTLQRIEQEIGINNDWTTSINGGPEYGKAVQYL
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 4High Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013255055.126688152669231-139-84.4555Acr0.52340087480-3.5124788Not found in ProphageNot found in Prophage--MSGKTSIYWNSVLEKKLDPLVKRHGGASRAITIVADRYEELMKREKRTLRELFSDGEVNLMLNNALSTAYEPGAVIPGAVLADTEDEIDAQFEYFGVNRGDIIKKLRSLNIGQQFALVDYLEELRGDAGGDDSTEEDH
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 4High Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013255056.126692902669850-187-32.53.7497AcrIIA6-0-WP_021145275.1|HTH_11|45.5|0.00410.94011131811.1740377Not found in ProphageNot found in Prophage--MTEIRVEKLSTDEIDQAEVRERWEILAEEHQNTNQFDNYSSTLYKDPETGRIYYYEDQINEYSLWEVEEDDLLGNTKKDYEAFVSEQVSEWISNSDDPIMESIAWGHRDPDSIKADPEYTGECKVLVIGNYYGYQPIQWARDESGWEEITFDSAAQAQEWIDEEEDGIYYLSHNEAGRPDYYIIEA
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 5Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_041866101.129786012978786+62-0.55.776Acr0.48420251777-1.9160964Not found in ProphageNot found in Prophage--MRDIRVPLDEEIIEEIKTGPLSITGGQGAASWVRQLILKELERYRSIKNGNSQLNVEAFHNNo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 5Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013255345.129788052979119+105610.1518AcrIIA15-0-WP_066196495.1|HTH_17|31.9|7.3e-050.561616162186-2.6338687Not found in ProphageNot found in ProphagePHAGE_Bacill_SPP1_NC_004166-gi|22855124|ref|NP_690730.1||3.65e-06-MDIVNRNETITFDDSIEGVTKTLAEALAMVVSKGIKPVVIEKQDTIVDVKGAAEYLKVSTATIHRMTKDREIPYFKVKGNNRFSIKELEKYISNQMIHPNKRRKNo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 6Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013255346.129794842979939-152-25.2312Acr0.6235026421075-4.436506Not found in ProphageNot found in Prophage--MKRAYLLFISLTFLLFGCATYDTSFRQQIQKDVVFFLPELDDPLNIGKVISQEFDKRNIEILRIDPNYVEKGTYSADAIGKDIQRIAVHFKYRYYFDVVHNVITDLSIRWVEISSGLILAEGTASGDSPYGANKTVSKVINSMLDEYLVERNo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 6Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013255347.129800702980450-127-2.55.0278WP_074521680.1|HTH_19|AcrIIA1|30.9|6.4e-050.081148804165-2.5394113Not found in ProphageNot found in ProphagePHAGE_Vibrio_CTX_NC_015209-gi|332672299|ref|YP_004286233.1||1.26e-04-MVSKWSIFSDKESMDFIDRVKEELRNQKKTQEWLAWKAGISYNTLKGWTAKGRLPNVEQATAIAKALNTTVEYLVTGEEADSWQPPHRYADLFNLLEELDEPELEAMRVLAEGYVARKQNRAQREANo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 7Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013255348.129818652982401+179-2.55.35773300005611_____Ga0074647_1000046_77|HTH_Crp_2|AcrIIA7|44.2|5.1e-370.454127981306-4.64289Not found in ProphageNot found in ProphagePHAGE_Entero_Bp4_NC_024142-gi|640884689|ref|YP_009031998.1||1.02e-42AcrIIA7|41.9MELEEKESLQGFIGVKRIKARSMTRRGYNGYRGWQLPADENGDDEGMLVEYVDGGKSNHPAHEGYISWSPIDVFNHAYRPCDALTFGFAIEAAKAGEKIARKGWNGKGMFVFYQKGYPEGIPINKNTAEATRLPEGTVCKFRPYLMMKTAQNDFVPWVASQTDILAEDWEIIEQGEQKNo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
Acr-Aca 7Medium Confidence Sediminispirochaeta smaragdinae DSM 11293NC_014364.1WP_013255349.129823982982652+8538.791Acr0.465523425160-2.4907458Not found in ProphageNot found in Prophage--MSIETKEKAAPGKDTAKNNNHTNITMIGFRQQELHEIEKSLEEMDHKIQELFRFGTAHNRDIFAMKLANEVRRIRDQLNSGRLMNo
Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

GCF NC ID Start End Strand Protein ID aa Length PaCRISPR_score AcRanker Rank AcRanker Score AcRanker Rank ProphageAcRanker Score Prophage Acr_Hit|pident sequence lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_000143985.1NC_014364.123387342339270+WP_013254754.11790.4232564781450-4.757082574-4.7570825AcrIIA7|41.9MELEEKESLQGFIGVKRIKARPMTRRGYNGYRGWQLPADENGDDEGMLVEYVDGGKSNHPAHEGYISWSPIDVFNRAYRPCDALTFGFAIEAAKAGEKIARKGWNGKGMFVFYQKGYPEGIPINKNTAEATRLPEGTVCKFRPYLMMKTAQNDFVPWVASQTDILAEDWEIIEQGEQKBacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
GCF_000143985.1NC_014364.123392672339521+WP_013254755.1850.53371363102-2.0705915-2.070591---MSIETKEKAAPGKDTATENNHTNTTMIGFRQQELHEIEESLEEMDHKIQELFRFGTAHNRDIFAMKLSGEVRRIRDQLNEGRLMBacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
GCF_000143985.1NC_014364.129818652982401+WP_013255348.11790.454127981306-4.64289Not found in ProphageNot found in ProphageAcrIIA7|41.9MELEEKESLQGFIGVKRIKARSMTRRGYNGYRGWQLPADENGDDEGMLVEYVDGGKSNHPAHEGYISWSPIDVFNHAYRPCDALTFGFAIEAAKAGEKIARKGWNGKGMFVFYQKGYPEGIPINKNTAEATRLPEGTVCKFRPYLMMKTAQNDFVPWVASQTDILAEDWEIIEQGEQKBacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae
GCF_000143985.1NC_014364.129823982982652+WP_013255349.1850.465523425160-2.4907458Not found in ProphageNot found in Prophage---MSIETKEKAAPGKDTAKNNNHTNITMIGFRQQELHEIEKSLEEMDHKIQELFRFGTAHNRDIFAMKLANEVRRIRDQLNSGRLMBacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sediminispirochaeta; Sediminispirochaeta smaragdinae

3. CRISPRCasFinder Summary

GCF NC_ID CRISPR arrays Nb CRISPRs Evidence levels Cas clusters Nb Cas Cas Types/ Subtyes
GCF_000143985.1NC_014364NC_014364_1[1128272;1133461] (evidence-level=4), NC_014364_2[1713837;1713997] (evidence-level=1),2Nb_arrays_evidence-level_1=1,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1CAS-TypeIC[1120569;1128117],1CAS-TypeIC (n=1),