Results - Acr-Aca DB

Anti-CRISPR Results - GCF_000521655.1 (Total 3 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Mannheimia varigena USDA-ARS-USMARC-1296	NZ_CP006943.1	WP_025217344.1	1174874	1175161	-	96	4	9.6573	AcrIF11-0-WP_086368794.1\|HTH_31\|34.4\|1.5e-12	0.132375944	111	-2.8760624	Not found in Prophage	Not found in Prophage	PHAGE_Klebsi_phiKO2_NC_005857-gi\|46402134\|ref\|YP_006628.1\|\|1.05e-18	-	MKVQPISYKTVKDKLLSDEKVKTLYLEEKAADEVQSLLYEMRSKAGLNISQVAERMGVSQPAVSKLERNADKATLSSLLRYAQACGMELKLSARY	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena
Acr-Aca 1	Medium Confidence	Mannheimia varigena USDA-ARS-USMARC-1296	NZ_CP006943.1	WP_025217345.1	1175136	1175471	-	112	0.5	7.0193	Acr	0.159399775	543	-4.410006	Not found in Prophage	Not found in Prophage	PHAGE_Klebsi_phiKO2_NC_005857-gi\|46402135\|ref\|YP_006629.1\|\|3.64e-34	-	MFELLFHPEAFSELDELSDTMKAKLLAKLDKLELLGNELRFPDTRPIQDGLFELRVGKKDITRTFFAFAIGRKIYILRTFVKKTQKTPPAEIELALKRLQEMTDESTTNLV	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena
Acr-Aca 2	Medium Confidence	Mannheimia varigena USDA-ARS-USMARC-1296	NZ_CP006943.1	WP_025217997.1	1899702	1900034	+	111	0	6.3935	Acr	0.151985934	319	-3.9250817	Not found in Prophage	Not found in Prophage	-	-	MNLTFIELPPFERFRDENLTDEDYRAFQNELLDNPETGDLIQGLNGLRKIRLADSKRNKGKRGGIRAIYYYFISRDQVYLVTAYGKDKQEDLTTEQRKSLSAIIDLIKTL	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena
Acr-Aca 2	Medium Confidence	Mannheimia varigena USDA-ARS-USMARC-1296	NZ_CP006943.1	WP_025217998.1	1900043	1900351	+	103	4	10.0901	AcrIIA3-2-3300007641_____Ga0105527_100566_21\|HTH_XRE\|35.4\|3.2e-05	0.098769931	393	-4.120035	Not found in Prophage	Not found in Prophage	PHAGE_Clostr_phiMMP02_NC_019421-gi\|414090411\|ref\|YP_006990524.1\|\|2.04e-04	-	MATLYDDLLEGLTAMKEHLEGKRTLRTETLSRPEPLHISADEVKAIRARLNLSQAVFAKRLRTSTKTYQGWEQGKSTPNPQATILLRLVEQSPQVFEQIARL	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena
Acr-Aca 3	Medium Confidence	Mannheimia varigena USDA-ARS-USMARC-1296	NZ_CP006943.1	WP_025218252.1	2175974	2176258	-	95	1.5	7.1642	Acr	0.126601186	526	-4.372476	Not found in Prophage	Not found in Prophage	-	-	MRYWLISLSILLSGCVVPVAPTGQAGIPMPIIIGVSDQIDSSAVHICTLKPFTQEYRSEHSSRGRAKLNVQKQCLANHSEMFCEEKDIVCKTYD	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena
Acr-Aca 3	Medium Confidence	Mannheimia varigena USDA-ARS-USMARC-1296	NZ_CP006943.1	WP_025218253.1	2176288	2176473	-	62	9	10.1765	Acr	0.150379891	295	-3.8413677	Not found in Prophage	Not found in Prophage	-	-	MKCRQATELISQSCDEKLRLQQHMRLQLHLLICPKCRNFNKNTKKLGKILRAYCNDKDVPF	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena
Acr-Aca 3	Medium Confidence	Mannheimia varigena USDA-ARS-USMARC-1296	NZ_CP006943.1	WP_038643333.1	2176470	2177036	-	189	3.5	7.3911	WP_095590313.1\|HTH_23-0-AcrIF6\|37.5\|7e-07	0.136930029	57	-2.3178089	Not found in Prophage	Not found in Prophage	PHAGE_Pseudo_PA11_NC_007808-gi\|149408171\|ref\|YP_001294605.1\|\|0.004	-	MKSLSSTQIEEIRKQMVKFATLQLADKDLAEDVVQDALTNAYKHSASFRREAALKTWIFAILKNKILDLLRTRKRHIPVSSLCEEEESPSAFFDRHDHWLEHQDVTEWRGIAQSTYRKEFWAIFDICLNKLSAQQARVFMMREHLDMSSAEICHECEISLSNLNVLLYRARLRLQDCLSRNWFREESK	No		Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_000521655.1	NZ_CP006943.1	970890	971927	-	WP_025217181.1	346	0.607613605	145	-3.1085405	Not found in Prophage	Not found in Prophage	AcrVA3\|45.0	MSRATKINWSELDWSKSTLELSKMLNVAGNFVSLKRRKYAPNTVRQKKAVDWSAIDWSKSTSDIAKQIGWSVANVSQKRKKYAPDTMGNLRNVGKYKRKVKPTVLKAPNGDILYMDSIKDFVIEYAHLFEAKHLISKNKKSGNHIRQYCLAESALSSLRQKRVKKWQGWSLYEGFEEQSKLKRIDWDNVDWTKNNDQLAKELNRAYDTVAKKRYLLGKSGMATSRKEKADKGQKNPKKAIGAIKTQPIAKEWAKKSQKSGKFETNVHAKRWRLTREDGKCWEFTNLYHFVRTHTELFLPNDTVWKRTGGKRGTGGEYCNATSGLLNACRSRSKKWKGWKIEKIEN	Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_000521655.1	NZ_CP006943	NZ_CP006943_1[1314276;1314840] (evidence-level=4), NZ_CP006943_2[1496013;1496444] (evidence-level=4),	2	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIC[1496642;1508539],	1	CAS-TypeIC (n=1),