1.1 Guilt-by-Association (Tabular View)
| Loci ID |
Classification |
Organism |
Refseq ID |
Protein ID |
Start |
End |
Strand |
aa Length |
Charge |
Isoelectric Point |
Acr/Aca |
PaCRISPR_score |
AcRanker Rank |
AcRanker Score |
AcRanker Rank Prophage | AcRanker Score Prophage | MGE/Propahge Metadata |
Acr_Hit |
sequence |
Self Target w/in 5000 BP |
Self Target Outside 5000 BP |
lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies) |
| Acr-Aca 1 | Medium Confidence | Magnetospira sp. QH-2 | NZ_FO538765.1 | WP_046020196.1 | 354032 | 354265 | + | 78 | -2 | 4.5003 | Acr | 0.306279258 | 2341 | -5.5986314 | Not found in Prophage | Not found in Prophage | - | - | MNQVDVLIYAKGGFDLGFGQELAQQLTDLDGVGKVRFNPDRPGVLQVFYDPTKLASVDLLAQARTGAACDSLRLIGA | No | | Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira; Magnetospira sp. QH-2 |
| Acr-Aca 1 | Medium Confidence | Magnetospira sp. QH-2 | NZ_FO538765.1 | WP_046020197.1 | 354267 | 354755 | + | 163 | -0.5 | 5.9598 | WP_057265726.1|HTH_38|AcrIE7|32.1|2e-07 | 0.102122896 | 927 | -4.7830462 | Not found in Prophage | Not found in Prophage | PHAGE_Microc_Ma_LMM01_NC_008562-gi|117530307|ref|YP_851150.1||1.38e-04 | - | MADDGLLSIGRAAAWLGVAPSALRYYETEGLLTPQRTDKGTRRYRPADLDRLALVRGLADLGVPLVKLRDLAESRQTSQSGDEAGRRVAALFDDLQRDLEIKMAECRRLSEQVAEARERVAACFGCDRPPTPQGCRHCPTASQLTRTAAMGLVWESEDFQGS | No | | Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira; Magnetospira sp. QH-2 |
| Acr-Aca 2 | Medium Confidence | Magnetospira sp. QH-2 | NZ_FO538765.1 | WP_046020348.1 | 580659 | 581114 | - | 152 | 2 | 7.3982 | WP_143972073.1|HTH_3|AcrIIA1|35.3|4.2e-08 | 0.055538136 | 346 | -3.827444 | Not found in Prophage | Not found in Prophage | PHAGE_Sinorh_PBC5_NC_003324-gi|18071257|ref|NP_542325.1||4.83e-21 | - | MEKRRTKGSADPIDKYVGTRVRARRMGLRLSQTKLGEAIGVTFQQVQKYENGTNRIGSSNLFKISRVLDVDVSHFFEGIPDATLVNSGVPVPGMSDQPQVTFDHDPMNSREAIEMMHNYYRIADEDVRKKLYQFVKSLANSYTQGHDEEGD | No | | Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira; Magnetospira sp. QH-2 |
| Acr-Aca 2 | Medium Confidence | Magnetospira sp. QH-2 | NZ_FO538765.1 | WP_046020349.1 | 581260 | 581724 | - | 155 | 0 | 6.4908 | WP_143972073.1|HTH_3|AcrIIA1|32.8|1.6e-07 | 0.05804383 | 742 | -4.5534186 | Not found in Prophage | Not found in Prophage | PHAGE_Caulob_CcrColossus_NC_019406-gi|414088308|ref|YP_006988486.1||6.80e-14 | - | MTSDKFGHSRGTSNNHATQEPTNDPRASEPHPIDVAVGQQMKERRTGLRISRKVLARDIGVSPQQIAKYEHGLTRISASALYVISDTLGILVEELFHGVDDRLCTVGPTDSAPLDNHALKNDLMDFLEVYVRIENPVIRRTLLDVIRAMGSTES | No | | Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira; Magnetospira sp. QH-2 |
1.2 Guilt-by-Association (Graphic View)
Download
SVG
PNG
1.3 Guilt-by-Association (Jbrowse View)