Anti-CRISPR Results - GCF_000968535.2 (Total 5 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Loci ID Classification Organism Refseq ID Protein ID Start End Strand aa Length Charge Isoelectric Point Acr/Aca PaCRISPR_score AcRanker Rank AcRanker Score AcRanker Rank ProphageAcRanker Score Prophage MGE/Propahge Metadata Acr_Hit sequence Self Target w/in 5000 BP Self Target Outside 5000 BP lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014146849.1368058368615+186-74.681Acr0.525788292672-4.119117Not found in ProphageNot found in Prophage--MPQSKILVDTNAYLRLARTIRPLLFVPFGDNKYCLYVLPELNKELENRKLQSKFHWVDEEEFADNRKHFPKISKKQKSSIQQTFEYLWNHVQTDLPGPSRVDVMYIAYALELNVPVVTDDQDMTELANEFDTQVMSTLELLKIMLDCGHIDMKTIDGLCDYWRYIADLPANFKFDYDRLFSDPQDNo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 1Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014146850.1368711368905+650.57.0082AcrVA1-0-SRS2267655|NODE_151_length_6493_cov_11.540230_13|HTH_17|39.1|2.3e-070.14709714134-2.5850034Not found in ProphageNot found in ProphagePHAGE_Bacill_AP50_NC_011523-gi|211956447|ref|YP_002302513.1||2.61e-07-MSDVILTIKDVAEYLKVNERTIYRLVASGELPGFKVGNSWRFKQSELEQYIASQHNRTKFTDQENo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 2Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014147812.114861601486594+14537.806WP_131412738.1|HTH_27|AcrIIIB1|30.1|3.8e-070.1204410331752-5.062242Not found in ProphageNot found in Prophage--MHFRFGFLSYEISHVIRQRFNKNAEIIGITHSQWRVLVHLSENPNCRQVDLADILDIKPITLVKQLDQLEARNLVRRIKDSDDRRVYRLELTANALPVMQKLWDIADRVEAEVLGALTPDEQALVIRLLCRVKGAICGKEPDMSNo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 2Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014147813.114866431487170+17689.7324Acr0.2926596441335-4.8065467Not found in ProphageNot found in Prophage--MFDFIKKLKKSQTNGWIVGLFKKPAPASPDESDRQMLARVARQFFWLFIILFFFEDLLDFAVEIVHSVFEILHLLIEFIEGYIEEILEHLLHTDHHQSETIIVNAVLLIGMYGFYRFVRAFPRIVRRLKRSCYAAWLKYKRNKLAYWQALLPEQKIKLTAAYLVGLAMLLFWLTLNo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 3Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014149154.131099473110483+1792811.5395Acr0.0578066131916-5.144546Not found in ProphageNot found in Prophage--MAIIAFGGPDSPCVRATTPHHRILDAAPLHSHKWLYAVSRCLVFCLRLRYSRRLRQNTRRYGYRGLKIFTSLTLRFQDFQRLMHRIDALYTDYPFYGSRRMTAALRRLGYRVNRKRIRGLMAKMGLEAIYPKPNTSQSHPEHRIYPYLLNGVKIDRIRCGVPILLMFGSHKALPTWWPNo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 3Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_084685457.131104203110635+7229.5592AcrVA5-2-WP_087920907.1|HTH_Tnp_1|32.8|6.8e-050.153185725696-4.1486Not found in ProphageNot found in ProphagePROPHAGE_Escher_CFT073-gi|26250329|ref|NP_756369.1||1.41e-06-MWSTDITYVRLAQGFAYLVAVIDWYSRKVLAWLLSNTMDTSFAWTAWRPRYDTDNRIFSILTKAASLPVGNNo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 3Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014149155.131105123110874+121-2.55.1404AcrVA5-2-WP_087920907.1|HTH_Tnp_1|40.0|4.1e-100.145252749243-3.113981Not found in ProphageNot found in ProphagePHAGE_Shigel_Sf6_NC_005344-gi|41057343|ref|NP_958229.1||1.41e-11-MAFVQYDGHQFCLDCLEAALRHGQPDIFNTDQGSQFTSRELNGRLKEAGIRISMDGRGRALDSVFVERLWRSVKYENIYVRGYDTMTEAQTGLADYFQFYNETKPHQSLNYATPQEVYGGNo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 4Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014150425.146366024636973+124-2.55.8409AcrIIA14-0-WP_057707492.1|HTH_5|41.5|1.1e-190.121347079415-3.612256Not found in ProphageNot found in Prophage--MIISPELAAKDCCDEQETHPDLLARAIPDLPDEYEAGRLADLFKALADPTRVRIIAALLHTELCVDDLANLLDMSQSAISHQLRLLRNLHLVQFRRSGKHAFYRLVDDHVRDLFQRSREHLDCNo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 4Medium Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014150426.146370154637341+109-0.56.4596Acr0.157439065535-3.895544Not found in ProphageNot found in Prophage--MKHHIHTEHKHVHNEYCGHMRIEHDGHVDYLHDGHLHHAHQDHYDEHVIAVTETNPAVCAPLDCACGHEGCGHAAIPHGDHIDYIVNGRLHHPHGDHCDDHGPVTIINNo
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 5High Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_014150447.146567784657113-112-64.3253Acr0.745009017862-4.3649564Not found in ProphageNot found in Prophage--MASFKETVESKGSNRDVIILIGDQARQVVESTWACNSPKLVFNENIDPSDINWPVENKTVILRLCGNTIKNEQPLKLVQNLLEAGALYVLVVYQNLEMMRFEPEMEDFKVE
NoBacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum
Acr-Aca 5High Confidence Methylomicrobium alcaliphilum 20ZNC_016112.1WP_046061286.146571334657387-8559.9332AcrIIA13-0-WP_006662529.1|HTH_17|35.5|0.000180.193396156385-3.5462117Not found in ProphageNot found in Prophage--MTNEKEIKLQPFILPPDGSLVRAYGILGDRKKGIIGCCEMSRTMLWSQVNIGRFPKPLKIGRIAAWRAEDIREYLKDPENYQAR
NoBacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium; Methylomicrobium alcaliphilum

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

GCF NC_ID CRISPR arrays Nb CRISPRs Evidence levels Cas clusters Nb Cas Cas Types/ Subtyes
GCF_000968535.2NC_016112NC_016112_1[1109992;1110086] (evidence-level=1), NC_016112_2[1516465;1519654] (evidence-level=4), NC_016112_3[2435093;2437273] (evidence-level=4), NC_016112_4[3711360;3711431] (evidence-level=1), NC_016112_5[4283753;4285859] (evidence-level=4),5Nb_arrays_evidence-level_1=2,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=3CAS-TypeIC[1508368;1516284], CAS-TypeIC[2437452;2445538], CAS-TypeIE[4289690;4297431],3CAS-TypeIC (n=2), CAS-TypeIE (n=1),