Anti-CRISPR Results - GCF_003325495.1 (Total 3 loci with Aca homologs)

1. Guilt-by-Association

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1.1 Guilt-by-Association (Tabular View)

Loci ID Classification Organism Refseq ID Protein ID Start End Strand aa Length Charge Isoelectric Point Acr/Aca PaCRISPR_score AcRanker Rank AcRanker Score AcRanker Rank ProphageAcRanker Score Prophage MGE/Propahge Metadata Acr_Hit sequence Self Target w/in 5000 BP Self Target Outside 5000 BP lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1Medium Confidence Chromobacterium sp. IIBBL 274-1NZ_CP029554.1WP_114072322.1330704331054+1178.510.6527WP_005567622.1|HTH_35-3-AcrIF9|39.3|5.9e-100.107868811151-5.147241Not found in ProphageNot found in ProphagePHAGE_Rhodob_RcapMu_NC_016165-gi|356870845|ref|YP_004934650.1||6.08e-12-MSTTQPGWHKEDIKAAIRKRGITMNALALARKLPPSTIRNALIRPVFSGEIAIAEFLGVPAHELWPDRWTPDGRRIRPRYAHKYREQCSDSQRKAVMYLLTPNSNELSAGLVTEVNNo
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1
Acr-Aca 1Medium Confidence Chromobacterium sp. IIBBL 274-1NZ_CP029554.1WP_114072323.1331074331598+17569.2649Acr0.0665399371167-5.1559386113-5.1559386PHAGE_Ralsto_RS138_NC_029107-gi|985760911|ref|YP_009226509.1||4.00e-14-MSRRKRSERPPHGDGQLPLNFDLFAIETPKGVVAAQGENVFDAGIRQSLVVVLDAAFARGLSRDRVADLMSEKLARSVNKAHLDLWTAPSQAERRIPVDALMALMDACSDFSPLEWIAHHVGRKVLTADEALCAEFGAMAVLDRHIKAKQKSIEGQMDEKLLSQLMHRMKRSAKNo
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1
Acr-Aca 2Medium Confidence Chromobacterium sp. IIBBL 274-1NZ_CP029554.1WP_114074422.1937980938246+89810.9985WP_056710949.1|HTH_17|AcrIIA14|44.6|5.4e-080.1415009741756-5.398834158-5.398834PROPHAGE_Ralsto_GMI1000-gi|17546157|ref|NP_519559.1||7.94e-21-MDQGLVVGFPVGSAVTFRSGLGHAAILPSRRTGGFVQQRHWKKKYGGLGVSELPRLKQLEEENARLKRMVADLSPDKPMLQEVIQKKLNo
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1
Acr-Aca 2Medium Confidence Chromobacterium sp. IIBBL 274-1NZ_CP029554.1WP_114072639.1938243938467+751312.2064Acr0.150440444227-3.9559307Not found in ProphageNot found in Prophage--MRPARKRELANVLIDAYRVSIRRATAVIQLRQATYFYRPHPRDDRAERQRIREIATRIRYGARRIHALLLREGWNo
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1
Acr-Aca 3Medium Confidence Chromobacterium sp. IIBBL 274-1NZ_CP029555.1WP_114074582.12129921658+12028.68AcrIIA1-0-WP_094075268.1|HTH_19|36.1|0.00290.120588786781-4.882453Not found in ProphageNot found in ProphagePHAGE_Erwini_PEp14_NC_016767-gi|374531892|ref|YP_005098448.1||1.07e-05-MSTAFPQNLNVRTMRNNAGQNQSQFWEPIGITQSGGSRYESGRNMPKPVAALVRLVHQLGIDISKVNADKASLIRVLLSDQVDPEILAALRKLAATAEALDKPAAASDTVPPDSHSAAVNo
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1
Acr-Aca 3Medium Confidence Chromobacterium sp. IIBBL 274-1NZ_CP029555.1WP_114074583.12174922240+164-104.1436Acr0.2039080761608-5.3507566Not found in ProphageNot found in ProphagePHAGE_Burkho_phi1026b_NC_005284-gi|38707936|ref|NP_945077.1||2.31e-07-MQTAQRTQCSGLVHSILGAQCLLLDVADARSIPSQLAYAEANRGNAPAAAQRMIEQAFAPCPVLRNEHGFWDHPAMVASDLNMDWPEWYARYGYQFATSTMADDADGANLLAIYDETGCCHLWEPLPPDAGAGWQLQSIFAADEIGPVALWIRPAAAAMECAANo
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1
Acr-Aca 3Medium Confidence Chromobacterium sp. IIBBL 274-1NZ_CP029555.1WP_114074584.12223722632+132-34.6683Acr0.1663909163060-5.728048Not found in ProphageNot found in Prophage--MSEAAICAELAGKPAGLSAKEIGKAIGEATPVLMEQLLLMVAAGTLKQRTVGRDQVFSLAKRQRPPAPEPAAVQEETAEVAPEVAPLPSASPRTPISGTLTLNLADDIITTGFQTVDQLQRFATALKEVTANo
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1
Acr-Aca 3Medium Confidence Chromobacterium sp. IIBBL 274-1NZ_CP029555.1WP_114074585.12262922871+81-0.56.3154Acr0.363848106948-5.021653Not found in ProphageNot found in Prophage--MIHSAEPADDLAHFALAYPGEQCKHPLPAINHLTLSSAEIARMMGFPRKDLAPAHAARLQRWAVFCDEQYLIPLERPDAPNo
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

GCF NC ID Start End Strand Protein ID aa Length PaCRISPR_score AcRanker Rank AcRanker Score AcRanker Rank ProphageAcRanker Score Prophage Acr_Hit|pident sequence lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_003325495.1NZ_CP029555.16682467180-WP_114074566.11190.1348778731510-5.3069916146-5.3069916---MDAIEQEIQAKGLTAPRVTPADVETAIAGEHYFTALEAVTGRTIECAIAVQQSHPLSLLTFCVLVLKNGFTVTGESACASPENFDAEIGRKIARQNAVNKVWPLLGYALKEKLQEAQABacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1
GCF_003325495.1NZ_CP029555.16718267673-WP_114074567.11640.4152442881597-5.345992150-5.345992AcrIIA7|41.7MQRYVGTKIIFAKPMTRGEYNEYRGWPLPPDEAASDAGYLVEYTDGGAPNHEQHAGYISWSPALSFELAYRRSDGLPFGLAVEAMKAGQRVARAGWNGKGMFLYLIKGTDLQSGLGYGFGEYVGEPAFVSTICMKTADNKLVAGWLASQTDMLADDWYILEGNBacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium; Chromobacterium sp. IIBBL 274-1

3. CRISPRCasFinder Summary

GCF NC_ID CRISPR arrays Nb CRISPRs Evidence levels Cas clusters Nb Cas Cas Types/ Subtyes
GCF_003325495.1NZ_CP029554NZ_CP029554_1[275532;278023] (evidence-level=4), NZ_CP029554_2[2551602;2551738] (evidence-level=1), NZ_CP029554_3[2552046;2552127] (evidence-level=1), NZ_CP029554_4[4155515;4158720] (evidence-level=4), NZ_CP029554_5[4166023;4167091] (evidence-level=4), NZ_CP029554_6[4176417;4178032] (evidence-level=4),6Nb_arrays_evidence-level_1=2,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=4CAS-TypeIC[267804;275340], CAS-TypeIE[4167264;4176315],2CAS-TypeIC (n=1), CAS-TypeIE (n=1),