1.1 Guilt-by-Association (Tabular View)
| Loci ID |
Classification |
Organism |
Refseq ID |
Protein ID |
Start |
End |
Strand |
aa Length |
Charge |
Isoelectric Point |
Acr/Aca |
PaCRISPR_score |
AcRanker Rank |
AcRanker Score |
AcRanker Rank Prophage | AcRanker Score Prophage | MGE/Propahge Metadata |
Acr_Hit |
sequence |
Self Target w/in 5000 BP |
Self Target Outside 5000 BP |
lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies) |
| Acr-Aca 1 | Medium Confidence | Thiomicrorhabdus aquaedulcis | NZ_AP018722.1 | WP_127470664.1 | 1086091 | 1086387 | - | 99 | 7.5 | 10.1721 | AcrVA5-2-WP_087920907.1|HTH_Tnp_1|31.3|1.3e-07 | 0.147620817 | 304 | -4.151532 | Not found in Prophage | Not found in Prophage | PHAGE_Paenib_Shelly_NC_041909-gi|100033|ref|YP_009598556.1||1.71e-05 | - | MIKRMVKAESNVSIEKLCNLLELPVSSYYYQPAVPPEQEKMNEMAEKMFDESFDTYGKRRLSNALRKEGFAMGVFKTSRLMKTLGLVAKRPKKPHPYP | No | | Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrorhabdus; Thiomicrorhabdus aquaedulcis |
| Acr-Aca 1 | Medium Confidence | Thiomicrorhabdus aquaedulcis | NZ_AP018722.1 | WP_127470665.1 | 1086384 | 1086704 | - | 107 | 7 | 10.3322 | Acr | 0.132349875 | 80 | -3.147049 | Not found in Prophage | Not found in Prophage | PHAGE_Shigel_Sf6_NC_005344-gi|41057344|ref|NP_958230.1||3.68e-06 | - | MTDNSRKDRINVTPKQKHEYARLMVQANYTNKQIMEISGAAASAVTRWKKQYLAEQRGEMIEGKIPLDADKRLIHELKQELAEAREDIRLLKKATALFIRDNPNLK | No | | Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrorhabdus; Thiomicrorhabdus aquaedulcis |
| Acr-Aca 2 | Medium Confidence | Thiomicrorhabdus aquaedulcis | NZ_AP018722.1 | WP_127471588.1 | 2292367 | 2292660 | - | 98 | 0 | 6.46 | Acr | 0.313395874 | 402 | -4.4150834 | Not found in Prophage | Not found in Prophage | - | - | MSFYGAYALYPGYFDGKNPEKNPYHEAIDEIDIGAFPFLPGKTENWWLIDFLGGRLGLTLKSDDSYAIKEGMPTYAHSNRLKSSKILLKNQNVSNLF | No | | Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrorhabdus; Thiomicrorhabdus aquaedulcis |
| Acr-Aca 2 | Medium Confidence | Thiomicrorhabdus aquaedulcis | NZ_AP018722.1 | WP_127471589.1 | 2292668 | 2292961 | - | 98 | -2 | 5.0893 | WP_077843130.1|HTH_26|AcrIIA1|33.3|0.00014 | 0.265862906 | 139 | -3.5559616 | Not found in Prophage | Not found in Prophage | PHAGE_Sulfit_pCB2047_A_NC_020858-gi|472341910|ref|YP_007675423.1||0.008 | - | MNTDANIHLGSNFDDFLAEEALLEESTAMAIKRVIAWQIEQEMKSQKLTKTVLAAKMHTSRAALNRLLDETDTSLTLTTLSSVANALGKSLRIELAG | No | | Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrorhabdus; Thiomicrorhabdus aquaedulcis |
| Acr-Aca 2 | Medium Confidence | Thiomicrorhabdus aquaedulcis | NZ_AP018722.1 | WP_127471590.1 | 2292958 | 2293305 | - | 116 | 9.5 | 11.2163 | Acr | 0.125296777 | 740 | -4.914531 | Not found in Prophage | Not found in Prophage | PHAGE_Shigel_Stx_NC_029120-gi|985761269|ref|YP_009226854.1||1.85e-09 | - | MNTLILHVRFFATSAGNEPVREWLKSLSAIDRKAIGEDIKTVQLGWPLGMPLVRKLAKDLWEIRIHLAGRIARVFFTVVSNTMVLLHGFIKKSQATPADDLETAKARIKQLRGER | No | | Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrorhabdus; Thiomicrorhabdus aquaedulcis |
1.2 Guilt-by-Association (Graphic View)
Download
SVG
PNG
1.3 Guilt-by-Association (Jbrowse View)