1.1 Guilt-by-Association (Tabular View)
| Loci ID |
Classification |
Organism |
Refseq ID |
Protein ID |
Start |
End |
Strand |
aa Length |
Charge |
Isoelectric Point |
Acr/Aca |
PaCRISPR_score |
AcRanker Rank |
AcRanker Score |
AcRanker Rank Prophage | AcRanker Score Prophage | MGE/Propahge Metadata |
Acr_Hit |
sequence |
Self Target w/in 5000 BP |
Self Target Outside 5000 BP |
lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies) |
| Acr-Aca 1 | Medium Confidence | Beijerinckiaceae bacterium | NZ_CP024846.1 | WP_135049631.1 | 1551224 | 1551715 | - | 164 | 2.5 | 7.8843 | Acr | 0.139307025 | 2117 | -5.7528844 | Not found in Prophage | Not found in Prophage | - | - | MQDSIVGSIIAFVFENFSAILFALALICAAIDRRRPAAARILSWLLLLPIGLGGLWAGFFHIAYPDVAAKFIGWKDSPFQFEVGMADLAFGVAGCVAFRASYGFKAATVLVNAIFLLGDAIGHVHQMMAAGNFAPGNAGAVFYLDIILPVTTIILLLMSRGAR | No | | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; UNKNOWN_genus; Beijerinckiaceae bacterium |
| Acr-Aca 1 | Medium Confidence | Beijerinckiaceae bacterium | NZ_CP024846.1 | WP_135051524.1 | 1551755 | 1552201 | - | 149 | 8.5 | 10.3775 | WP_008678850.1|HTH_27-0-AcrIIA1-1-AcrIIA1|53.6|8.2e-30 | 0.104035107 | 1224 | -5.4404564 | Not found in Prophage | Not found in Prophage | - | - | MPKLDQQLCFAVYSTMHAINKAYVPLLEKLALTYPQYLAMMVLWEADDLTVKQLGERLFLDSGTLTPLLKRLETMGLVNRARDPKDERQVRLKLTEKGKTLRRDAQAVPAQIARAMGRPADDLKGVRKELRKIRNALLESRASSQTAD | No | | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; UNKNOWN_genus; Beijerinckiaceae bacterium |
| Acr-Aca 2 | Medium Confidence | Beijerinckiaceae bacterium | NZ_CP024846.1 | WP_135051688.1 | 2466873 | 2467430 | - | 186 | -2.5 | 5.3085 | AcrIIA3-1-WP_018086463.1|HTH_24|32.8|0.00086 | 0.131854507 | 744 | -5.098108 | Not found in Prophage | Not found in Prophage | PHAGE_Sinorh_phiM9_NC_028676-gi|966199376|ref|YP_009189470.1||1.19e-17 | - | MTTDLLSVIPNLRAFAVSLCGNLDRADDLVQETLVKAWSNIDSFVEGTNLRAWLFTILRNIYYSEYRKRRREVADPDGAFASKLATAPAQGGHMDLLDFRAALQHLPSDQREALILIGASGLSYEEAAGVCGCAIGTMKSRVNRARSRLAEMLAITSGIEFGHEGEWQAIDPIIAGQRFSRGEGE | No | | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; UNKNOWN_genus; Beijerinckiaceae bacterium |
| Acr-Aca 2 | Medium Confidence | Beijerinckiaceae bacterium | NZ_CP024846.1 | WP_135050541.1 | 2467505 | 2467828 | - | 108 | 0.5 | 6.7111 | Acr | 0.113242994 | 414 | -4.6520824 | Not found in Prophage | Not found in Prophage | - | - | MTNDKYHQEGGAVIKSTKTSKPSIQAGDIHKSAKSSEAEDCEPAANAPGGVSCLKKAPSKSEIADQIGLHLRSVYDDVLAQPVPGRFLELLRQLESASEARLNKDAM | No | | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; UNKNOWN_genus; Beijerinckiaceae bacterium |
1.2 Guilt-by-Association (Graphic View)
Download
SVG
PNG
1.3 Guilt-by-Association (Jbrowse View)