Results - Acr-Aca DB

Anti-CRISPR Results - GCF_007954685.1 (Total 4 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_146990998.1	1388240	1388437	+	66	3.5	9.1872	WP_060665735.1\|HTH_3\|AcrIIA1\|56.7\|1.2e-16	0.147848672	74	-2.5780358	Not found in Prophage	Not found in Prophage	PHAGE_Lister_vB_LmoS_188_NC_028871-gi\|971750831\|ref\|YP_009204876.1\|\|2.96e-09	-	MPNKVRQFRLEQHLSQKEVAEKVGITRQTLSLIEKFAYNPSLKLCLNICYVLGRTLDEVFWEERK	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis
Acr-Aca 1	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_146989110.1	1388434	1388853	+	140	4.5	9.1016	Acr	0.123919121	1669	-5.4792185	Not found in Prophage	Not found in Prophage	-	-	MKKITDERLIVRNLKNQRTAFLVENGFILCVLAYQIFQGTPLDQVVAYDNMLFLALMVGCWTMIVLSVTVSTSMEDKAKVKLGKLLLLGLIVFVIAAGSFLWLLHGKHLLVALGSGLIIATIVTGINVLANHFRYSDQD	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis
Acr-Aca 2	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_035457679.1	2007649	2008107	+	153	4	9.8327	WP_065697283.1\|HTH_27\|AcrIIIB1\|30.1\|1.5e-07	0.125813433	291	-3.86165	Not found in Prophage	Not found in Prophage	-	-	MIDEMDSYIRQFNLVAQKIRQYLNQQLKDLNLTASTYFFILKVGERGTLSQEELFKVIYLNPSNVTRRLNRLIKLGYVVKEKSPTDGRSRVIKLTALGQQQYQQLLQRLPQINQTLVDSFDAQQRTILQQFLGIVDRDLDQLLSNKGDELNG	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis
Acr-Aca 2	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_146989782.1	2008100	2008687	+	196	0.5	6.6506	Acr	0.239862661	457	-4.2416153	Not found in Prophage	Not found in Prophage	-	-	MANHVLIKQRAVPALIIPDGFKLVTTETHRRNREQVRVDRFQMTPDFSPNNAHVTLVYGADERLISYNRFFVAAEQLKLPIKGDVVYIAEQTWQTVDPDYARGLHYMRTDTLPRFFIDDQGQRQSFKVQWVKFAHDNGSYNWVSVGPGGQVIELERESRWDYFQSRRATEEWNYDDWVLARNGQGPQLAAPEALA	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis
Acr-Aca 2	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_146989784.1	2008741	2008959	+	73	-14.5	3.6932	Acr	0.66198468	2	0.09801212	Not found in Prophage	Not found in Prophage	-	-	MNDREYEDLILQLGNLREHVRQLAETDYVTALYKGYSASGQTLAEINEEISTTDEEIRLLEWQIDDDEVDYE	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis
Acr-Aca 3	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_010013004.1	2803435	2803629	-	65	-5.5	4.2108	Acr	0.628550208	4	-0.1450327	Not found in Prophage	Not found in Prophage	-	-	MLYKEVKALFDDASERDLYWTDVWMKDSHNINAQQKSVEAGSEAMAYYRVLQLIVKNQASEDDD	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis
Acr-Aca 3	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_146990703.1	2803668	2803907	-	80	2	8.4419	WP_001198673.1\|HTH_3-0-AcrID1\|34.8\|4.9e-06	0.298207211	267	-3.8047233	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_phi5967PVL_NC_019921-gi\|431810248\|ref\|YP_007237133.1\|\|4.56e-21	-	MHKNLREARKTRNKTQYDVAGVIGLSPKQYGMKERGQVSFDLDEAEKVALYLDTPIDVLFPEYFFSSKVPKMHKEAEAS	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis
Acr-Aca 4	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_146990705.1	2804098	2804544	+	149	0.5	6.6506	WP_086295736.1\|HTH_XRE\|AcrIIA14\|34.8\|7.2e-14	0.069060895	48	-2.1776054	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_phi5967PVL_NC_019921-gi\|431810247\|ref\|YP_007237132.1\|\|1.84e-18	-	MDQHDLSDTDLANKVNVNRTTVTRWRSGARSPKLEKLPEIAAIFHEDPRIFIEPSVKAIHTTENRSDTLNSLFNKLSNLRQQRVLNFAKVQFNEQNNNVEQIREQKNSLPDTLAAHADDPKRIYSDKELADINNYLDTWIDHEENKKK	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis
Acr-Aca 4	Medium Confidence	Lactobacillus coryniformis	NZ_CP042392.1	WP_146990707.1	2804555	2804863	+	103	1.5	7.2427	WP_038187538.1\|HTH_23-0-AcrIIA1\|34.3\|9e-10	0.157511952	136	-3.1152837	21	-3.1152837	PHAGE_Entero_EFC_1_NC_025453-gi\|725950516\|ref\|YP_009103039.1\|\|7.86e-16	-	MTEFEKMLDEYSKHVTILEGNLYEKSGWWGCFKIKKGKPYIFIEHNQPEADKLAILVEEFKHFLTTVGVIINQTSAANRKQELLARRLTYKEVIPVDELIRC	No		Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus coryniformis

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_007954685.1	NZ_CP042392	NZ_CP042392_1[120780;123399] (evidence-level=4), NZ_CP042392_2[129986;134275] (evidence-level=4), NZ_CP042392_3[241833;241984] (evidence-level=1), NZ_CP042392_4[719581;724883] (evidence-level=4), NZ_CP042392_5[729665;731810] (evidence-level=4), NZ_CP042392_6[1874593;1874737] (evidence-level=1), NZ_CP042392_7[1907630;1910227] (evidence-level=4),	7	Nb_arrays_evidence-level_1=2,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=5	CAS-TypeIC[118445;129647], CAS-TypeIIU[724936;729522], CAS-TypeIE[1898208;1916583],	3	CAS-TypeIC (n=1), CAS-TypeIE (n=1), CAS-TypeIIU (n=1),