CAZyme Gene Cluster: NC_000913.3|CGC49

CGC gene composition diagram | Gene composition table | Substrate predicted by dbCAN-sub |  Substrate predicted by dbCAN-PUL search  |  Filtered homologs of dbCAN-PUL hits  

CGC gene composition diagram

Gene composition table

Protein ID Type Start End Strand Signature
NC_000913.3_3459 TC 3682161 3683447 - 2.A.23.1.7
NC_000913.3_3460 TC 3683630 3685579 - 9.B.34.1.8
NC_000913.3_3461 TC 3685700 3689173 - 1.B.55.3.1
NC_000913.3_3462 CAZyme 3689155 3690261 - GH8|GH8_e0
NC_000913.3_3463 TC 3690268 3692571 - 4.D.3.1.6
NC_000913.3_3464 CAZyme 3692618 3695236 - GT2

Substrate predicted by best dbCAN-PUL hit is cellulose download this fig


All filtered homologs of dbCAN-PUL hits

qseqid sseqid PULID pident length mismatch gapopen qstart qend sstart send evalue bitscore qlen slen
NC_000913.3_3461|TC PUL0311_4|TC PUL0311 100.000 1140 0 0 18 1157 1 1140 0.0 2326.0 1158 1140
NC_000913.3_3462|CAZyme|GH8;GH8_e0 PUL0311_3|CAZyme|GH8 PUL0311 100.000 368 0 0 1 368 1 368 0.0 760.0 369 368
NC_000913.3_3463|TC PUL0311_2|TC PUL0311 100.000 767 0 0 1 767 13 779 0.0 1567.0 768 779
NC_000913.3_3464|CAZyme|GT2 PUL0311_1|CAZyme|GT2;GT2_Glycos_transf_2 PUL0311 100.000 872 0 0 1 872 1 872 0.0 1803.0 873 872