logo
logo
help
CAZyme Information
You are here: Home > Sequence: WP_007212487.1
Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | Signalp annotations | TMHMM annotations | PSSpred annotations | LipoP annotations

Basic Information help

Species Bacteroides cellulosilyticus
CAZyme ID WP_007212487.1
CAZy Family GH5; 
CAZyme Description hypothetical protein
CAZyme Property
Protein Length Molecular Weight Isoelectric Point
469 54225.44 8.3781
Genome Property
Genome Assembly ID Genome Type GenBank ID RefSeq ID Length Total # of Proteins
GCF_001318345.1 Chromosome CP012801.1 NZ_CP012801.1 7084828 5193
Gene Location Start: 5234071;  End: 5235480  Strand: -
View CDS CDS sequence
UniProt ID A0A0P0GVF1;   E2NFQ9;  
InterPro Annotation A0A0P0GVF1;   E2NFQ9;  

Genomic Context   If it does not show, please wait or refresh. help

Also see NCBI Genome Browser

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in WP_007212487.1.

CAZyme Signature Domains help

Family Start End Evalue
GH5 55 317 5.4e-13

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value Start End Domain Description
pfam13204 DUF4038 2.28e-163 36 362
Protein of unknown function (DUF4038). A family of putative cellulases.
pfam12904 Collagen_bind_2 5.10e-46 368 458
Putative collagen-binding domain of a collagenase. This domain is likely to be the collagen-binding domain of a family of bacterial collagenase enzymes. It is the C-terminal part of the Structure 3kzs (information derived from TOPSAN).

CAZyme Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGL50932.1| GH5 1.3e-04 117 206 103 196

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MSY_A 2.0e-199 19 466 6 453
Chain A, Glycoside Hydrolase Bt_1012
3KZS_A 4.5e-191 19 466 6 453
Chain A, Crystal Structure Of Glycosyl Hydrolase Family 5 (Np_809925.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.10 A Resolution
4QFU_A 3.2e-184 24 466 24 469
Chain A, Crystal Structure Of A Glycoside Hydrolase Family 5 (bvu_2644) From Bacteroides Vulgatus Atcc 8482 At 1.90 A Resolution

Swiss-Prot Hits      help

WP_007212487.1 has no Swissprot hit.

SignalP Annotations help

Gram-positive-SP Gram-negative-SP
No signal petitide. No signal petitide.

TMHMM  Annotations      help

There is no transmembrane helices in WP_007212487.1.

PSSpred  Annotations      download dat.ss data help

color explanation:  coil(C), helix(H), beta(E)

LipoP Annotations      download full data without filtering help

class score margin cleavage
SpI 0.538147 0.73906 19-20