| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29675.m000388 |
| Family | CBM49 |
| Protein Properties | Length: 620 Molecular Weight: 69431.3 Isoelectric Point: 7.3138 |
| Chromosome | Chromosome/Scaffold: 29675 Start: 3686 End: 6936 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 528 | 607 | 3.6e-31 |
| VEFVHSITDTWSIGETTYYRHKVIIKNKSQKSIEDLKLVIQDLSGSIWGLSPTKEHNTYELPQWHKGLKPGSECSFVYVQ | |||
| GH9 | 28 | 488 | 0 |
| NYGEALDKTFLFFESQRSGKLPSNQRVKWRGDSGLKDGFLQGVNLVGGYYDAGDHVKFGLPMAFSVTMLAWGAIDFRKEITALNQMGHTLWAIRWGTDYF IKAHTEPNVLYAQVGDGDSDHYCWERAEDMTTPRNAYKLDQQNPGSDLAGETVAALAASAMAFKPYNSSYSNLLLVHAKQLFSFADRFRGLYDDSIKNAK EFYTSSGYSDELLWAAAWLYRATDDEYYLKYAVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGGTYTSTLKQYHAKADYFACACLRKNDGYN IQMTPGGLMYVREWNNLQYASAAAFLLAVYSDYLSYAHAKLSCPEGLIQPQELVNFAQSQADYILGKNPKSMSYIVGYGPQYPLHVHHRGSSIASIFVLH SSVECVQGFETWYHRTEANPNIIYGALVGGPDQNDNFSDDRSNYEQTEPALSGCAPLVGLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 620 Download |
| MRSLKFGLYI FIVGMLGLGA AIAAEAFNYG EALDKTFLFF ESQRSGKLPS NQRVKWRGDS 60 GLKDGFLQGV NLVGGYYDAG DHVKFGLPMA FSVTMLAWGA IDFRKEITAL NQMGHTLWAI 120 RWGTDYFIKA HTEPNVLYAQ VGDGDSDHYC WERAEDMTTP RNAYKLDQQN PGSDLAGETV 180 AALAASAMAF KPYNSSYSNL LLVHAKQLFS FADRFRGLYD DSIKNAKEFY TSSGYSDELL 240 WAAAWLYRAT DDEYYLKYAV DNAVYMGGTG WAVKEFSWDN KYAGVQILLS KILLEGRGGT 300 YTSTLKQYHA KADYFACACL RKNDGYNIQM TPGGLMYVRE WNNLQYASAA AFLLAVYSDY 360 LSYAHAKLSC PEGLIQPQEL VNFAQSQADY ILGKNPKSMS YIVGYGPQYP LHVHHRGSSI 420 ASIFVLHSSV ECVQGFETWY HRTEANPNII YGALVGGPDQ NDNFSDDRSN YEQTEPALSG 480 CAPLVGLFSK LQSLSEATGY YGKESSVPHT TKPGKKHFFP KRNKNVPVEF VHSITDTWSI 540 GETTYYRHKV IIKNKSQKSI EDLKLVIQDL SGSIWGLSPT KEHNTYELPQ WHKGLKPGSE 600 CSFVYVQGGP QAKVRVQSYH |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 1 | 620 | 620 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 7 | 619 | 621 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 10 | 496 | 489 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 15 | 491 | 477 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 28 | 489 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 2 | 620 | 3 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 25 | 620 | 27 | 627 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 33 | 620 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 21 | 620 | 20 | 611 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 1 | 620 | 1 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 26 | 487 | 2 | 431 | A Chain A, Crystal Structure Of Aquifex Aeolicus Lpxc Complexed With Imidazole. |
| PDB | 1ksc_A | 0 | 26 | 487 | 2 | 431 | A Chain A, Crystal Structure Of Aquifex Aeolicus Lpxc Complexed With Imidazole. |
| PDB | 1ks8_A | 0 | 26 | 487 | 2 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 26 | 556 | 3 | 487 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 26 | 556 | 3 | 487 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
