| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 32430.m000014 |
| Family | GH30 |
| Protein Properties | Length: 320 Molecular Weight: 34382.9 Isoelectric Point: 7.9533 |
| Chromosome | Chromosome/Scaffold: 32430 Start: 18 End: 977 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH30 | 54 | 320 | 0 |
| TDIAVFVDTSKRYQEVFGFGGAVTDAVAEVHATLTPAQQQAFLAAYFDPRAGLGYNILRTTIHSSDFGSGSYTYVREGDVSLGSFSIAPDQKLRIPLLRA ALAAARTHGADMRVFASPWSAPAWMKSNNSMLAGGSLLPQYRDTWARYVVKFVQAYEAAGIPLWGLSVQNEPMAKQKWESMIFSADEETRFLGDHLGPAL TSAGLGGKKIIVWDHNRDLLPQRAATILADAKARPYIWGVGYHWYETWAGGEPMHRNVAAVHAAWPD | |||
| Full Sequence |
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| Protein Sequence Length: 320 Download |
| MTGRAAAAPA AAPAAGAVAE PRGGWQVVTS APGADRFAAR PLGAFQPAGQ PPETDIAVFV 60 DTSKRYQEVF GFGGAVTDAV AEVHATLTPA QQQAFLAAYF DPRAGLGYNI LRTTIHSSDF 120 GSGSYTYVRE GDVSLGSFSI APDQKLRIPL LRAALAAART HGADMRVFAS PWSAPAWMKS 180 NNSMLAGGSL LPQYRDTWAR YVVKFVQAYE AAGIPLWGLS VQNEPMAKQK WESMIFSADE 240 ETRFLGDHLG PALTSAGLGG KKIIVWDHNR DLLPQRAATI LADAKARPYI WGVGYHWYET 300 WAGGEPMHRN VAAVHAAWPD |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5520 | COG5520 | 3.0e-40 | 58 | 310 | 256 | + O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | ||
| pfam02055 | Glyco_hydro_30 | 6.0e-51 | 52 | 299 | 259 | + O-Glycosyl hydrolase family 30. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0005764 | lysosome |
| GO:0006665 | sphingolipid metabolic process |
| GO:0007040 | lysosome organization |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM36048.1 | 0 | 23 | 320 | 5 | 300 | glycosyl hydrolase [Xanthomonas axonopodis pv. citri str. 306] |
| GenBank | EFF43943.1 | 0 | 53 | 320 | 17 | 281 | glycosyl hydrolase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] |
| RefSeq | XP_002539397.1 | 0 | 1 | 320 | 1 | 320 | glucosylceramidase, putative [Ricinus communis] |
| RefSeq | YP_001983760.1 | 0 | 2 | 319 | 7 | 323 | glycoside hydrolase family 30, gly30A [Cellvibrio japonicus Ueda107] |
| RefSeq | ZP_01223550.1 | 0 | 2 | 319 | 17 | 333 | glycosyl hydrolase [marine gamma proteobacterium HTCC2207] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3keh_B | 5.04467e-44 | 54 | 320 | 63 | 333 | A Chain A, Structure Of The Family43 Beta-Xylosidase From Geobacillus Stearothermophilus |
| PDB | 3keh_A | 5.04467e-44 | 54 | 320 | 63 | 333 | A Chain A, Structure Of The Family43 Beta-Xylosidase From Geobacillus Stearothermophilus |
| PDB | 3ke0_B | 5.04467e-44 | 54 | 320 | 63 | 333 | A Chain A, Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph. |
| PDB | 3ke0_A | 5.04467e-44 | 54 | 320 | 63 | 333 | A Chain A, Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph. |
| PDB | 3ril_D | 6.02558e-44 | 54 | 320 | 63 | 333 | A Chain A, Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO653148 | 245 | 57 | 298 | 0 |
| HO660351 | 135 | 164 | 298 | 6e-35 |
| DY281764 | 259 | 23 | 274 | 2e-33 |
| FC912907 | 238 | 23 | 253 | 3e-32 |
| FG051493 | 232 | 87 | 305 | 4e-30 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Ricinus communis | 35354.m000021 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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