| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma11g11200.1 |
| Family | CBM22 |
| Protein Properties | Length: 567 Molecular Weight: 64480.8 Isoelectric Point: 6.171 |
| Chromosome | Chromosome/Scaffold: 11 Start: 7966942 End: 7970370 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| CBM22 | 73 | 188 | 1.5e-22 |
| IIQNPELNNGLQGWTAFGDARIEHRESLGNKYVVAHRRNQAHDSVSQKIYLQKDKHYTLSAWIQVSEGNVPVTAIVKTTTRLKFAGAIFAESNCWSMLKG GFTADESGPAELYFEG | |||
| GH10 | 222 | 493 | 0 |
| HNSYILNNGLYKNWFTSRFTVTTFENEMKWYSTENVQGREDYSVADAMLQFVKQHNIAVRGHNIFWDDPRYQPGWVPSLSPYQLNSAVEKRVRSVVSRYR GQLISWDVVNENLHFSFFEGKLGQAFSGRIFHEAHNIDGQTTLFLNEYNTIEDSRDGVSIPARYIQKLKKIQSYPGNAGLPIGIGLEAHFSGPGINFPYL RASIDYLAATRLPIWITELDVASQPRQYFELALRELHGHPMVRGIVMWTAWSPQGCYRICLVDNNFRNLPAG | |||
| Full Sequence |
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| Protein Sequence Length: 567 Download |
| MVMVFGWKVA TLVRDGGGLV GGAVVMVNVL EEELIYLSFV TTTGFEAEAL SYDYSASIEC 60 LAHPQNPLYN GGIIQNPELN NGLQGWTAFG DARIEHRESL GNKYVVAHRR NQAHDSVSQK 120 IYLQKDKHYT LSAWIQVSEG NVPVTAIVKT TTRLKFAGAI FAESNCWSML KGGFTADESG 180 PAELYFEGNN TSVEIWIDNV ALQPFTEGEW RSHQDESIEK CHNSYILNNG LYKNWFTSRF 240 TVTTFENEMK WYSTENVQGR EDYSVADAML QFVKQHNIAV RGHNIFWDDP RYQPGWVPSL 300 SPYQLNSAVE KRVRSVVSRY RGQLISWDVV NENLHFSFFE GKLGQAFSGR IFHEAHNIDG 360 QTTLFLNEYN TIEDSRDGVS IPARYIQKLK KIQSYPGNAG LPIGIGLEAH FSGPGINFPY 420 LRASIDYLAA TRLPIWITEL DVASQPRQYF ELALRELHGH PMVRGIVMWT AWSPQGCYRI 480 CLVDNNFRNL PAGNVVDRLL SEWRLSKLSG MTDQNGFFEA NLFHGDYEME ISHPVMKNYT 540 FTQRLQVTPI EEYFKETKQF VQLSMK* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 8.0e-6 | 80 | 192 | 123 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 3.0e-35 | 240 | 492 | 292 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 8.0e-52 | 222 | 496 | 305 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-70 | 249 | 496 | 273 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN10199.1 | 0 | 44 | 534 | 24 | 553 | endoxylanase [Carica papaya] |
| RefSeq | XP_002264556.1 | 0 | 33 | 564 | 91 | 657 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264605.1 | 0 | 43 | 564 | 18 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313180.1 | 0 | 59 | 533 | 2 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532418.1 | 0 | 44 | 552 | 15 | 559 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ta3_B | 4e-27 | 221 | 501 | 20 | 303 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 1tux_A | 9e-24 | 238 | 500 | 38 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1nq6_A | 2e-23 | 227 | 496 | 24 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2bnj_A | 3e-23 | 238 | 502 | 38 | 303 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1k6a_A | 6e-23 | 238 | 502 | 38 | 303 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX266128 | 274 | 232 | 503 | 0 |
| BI312030 | 245 | 323 | 565 | 0 |
| BI310394 | 231 | 337 | 565 | 0 |
| CF068759 | 220 | 330 | 547 | 0 |
| EX266128 | 29 | 508 | 534 | 0.068 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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