| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_10434167g0010 |
| Family | CBM22 |
| Protein Properties | Length: 355 Molecular Weight: 39414.3 Isoelectric Point: 4.8493 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM22 | 66 | 187 | 1.5e-24 |
| IIRNPGFDNGTNGWTGFGSASVALQIESQDNGNKYLVTSNRQERFHSPAQTLENLRQDVKYALSAWVQIRSGSSALVTATVGLGNVSFTCAGNVHATSGC WSFLKGGFVPDWSPSHYWLHFE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 355 Download |
| MTGPTWHEIV EASAAAAADN KSSLCLLFCF PQFDAMAGPG PSIGEFSRRM KLCEPYPPAP 60 LYDGGIIRNP GFDNGTNGWT GFGSASVALQ IESQDNGNKY LVTSNRQERF HSPAQTLENL 120 RQDVKYALSA WVQIRSGSSA LVTATVGLGN VSFTCAGNVH ATSGCWSFLK GGFVPDWSPS 180 HYWLHFEELR NSGRVMEGIG LESHFSKPNI PLIRAVLDKF STLDLPIWLT EVDVSSKFDQ 240 ETQARYLEEI LREGFSHPAV EGIMMWTALH SYGCYQMCLT DNAFNNLAAG DVVDRLLDDW 300 TTQLRGTTDE NGCFKFEGFL GDYDFVALYA TKNVSKTWTL RQLDRDGVEH VYIQI 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 5.0e-7 | 187 | 247 | 63 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam02018 | CBM_4_9 | 3.0e-8 | 64 | 193 | 135 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-10 | 187 | 266 | 87 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 3.0e-24 | 187 | 293 | 117 | + Glycosyl hydrolase family 10. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94922.1 | 0.00000004 | 126 | 187 | 2 | 63 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABF94922.1 | 0 | 182 | 355 | 298 | 470 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001049529.1 | 0 | 182 | 355 | 229 | 401 | Os03g0243700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002277675.1 | 0.0000000004 | 53 | 186 | 36 | 140 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277675.1 | 0 | 182 | 355 | 377 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vbu_B | 0.001 | 187 | 273 | 194 | 288 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1vbu_A | 0.001 | 187 | 273 | 194 | 288 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1vbr_B | 0.001 | 187 | 273 | 194 | 288 | A Chain A, Crystal Structure Of Complex Xylanase 10b From Thermotoga Maritima With Xylobiose |
| PDB | 1vbr_A | 0.001 | 187 | 273 | 194 | 288 | A Chain A, Crystal Structure Of Complex Xylanase 10b From Thermotoga Maritima With Xylobiose |
| PDB | 3nj3_B | 0.002 | 187 | 272 | 210 | 303 | A Chain A, Crystal Structure Of Complex Xylanase 10b From Thermotoga Maritima With Xylobiose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EX330854 | 174 | 182 | 355 | 0 |
| EX330501 | 204 | 21 | 187 | 0 |
| FL717609 | 191 | 166 | 355 | 0 |
| FL818807 | 175 | 182 | 355 | 0 |
| AW497884 | 175 | 182 | 355 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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