Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_159042g1050 |
Family | GT9 |
Protein Properties | Length: 316 Molecular Weight: 34674.8 Isoelectric Point: 10.1787 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT9 | 78 | 292 | 1.3e-40 |
AFKARLKSVKAEKVIDTQGLIRSALIAKAANGERHGYDASSIKEPVASWFYDVKHAVARDQHAVMRNRTLTGLSLGYRPDQAIDYGLIKPPRSGDARYAV LFHGTSRASKEWREVDWIGAGKWLHAQGLEVVLPWGNERERSRSERLAQAIPGSRILDRVPLDETAKVIANASLVVGVDTGLLHLAAAYEVPLIAVFLAT DPGLTGPVGNGSITV |
Full Sequence |
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Protein Sequence Length: 316 Download |
MPGIIFIKTS SLGDVVHHMP AVTDAHRHAP DARLTWVVEE AFAPLARLHP AVSEVIPVST 60 RRWRSQLMRS KTWSEVSAFK ARLKSVKAEK VIDTQGLIRS ALIAKAANGE RHGYDASSIK 120 EPVASWFYDV KHAVARDQHA VMRNRTLTGL SLGYRPDQAI DYGLIKPPRS GDARYAVLFH 180 GTSRASKEWR EVDWIGAGKW LHAQGLEVVL PWGNERERSR SERLAQAIPG SRILDRVPLD 240 ETAKVIANAS LVVGVDTGLL HLAAAYEVPL IAVFLATDPG LTGPVGNGSI TVVGGKDVYP 300 SFERVIEAAE KLPLKR |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01075 | Glyco_transf_9 | 6.0e-44 | 76 | 296 | 234 | + Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core. | ||
cd03789 | GT1_LPS_heptosyltransferase | 4.0e-45 | 4 | 297 | 298 | + Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
COG0859 | RfaF | 3.0e-64 | 1 | 307 | 318 | + ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | ||
PRK10964 | PRK10964 | 2.0e-101 | 4 | 286 | 289 | + ADP-heptose:LPS heptosyl transferase I; Provisional | ||
TIGR02193 | heptsyl_trn_I | 6.0e-128 | 4 | 312 | 317 | + lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_949326.1 | 0 | 1 | 312 | 1 | 312 | lipopolysaccharide heptosyltransferase I [Rhodopseudomonas palustris CGA009] |
RefSeq | YP_001993483.1 | 0 | 1 | 312 | 1 | 312 | lipopolysaccharide heptosyltransferase I [Rhodopseudomonas palustris TIE-1] |
RefSeq | YP_002288327.1 | 0 | 1 | 311 | 1 | 312 | lipopolysaccharide heptosyltransferase I [Oligotropha carboxidovorans OM5] |
RefSeq | YP_531309.1 | 0 | 1 | 312 | 4 | 315 | lipopolysaccharide heptosyltransferase I [Rhodopseudomonas palustris BisB18] |
RefSeq | YP_780379.1 | 0 | 1 | 312 | 1 | 312 | lipopolysaccharide heptosyltransferase I [Rhodopseudomonas palustris BisA53] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2gt1_B | 0 | 4 | 292 | 3 | 297 | A Chain A, E. Coli Heptosyltransferase Waac. |
PDB | 2gt1_A | 0 | 4 | 292 | 3 | 297 | A Chain A, E. Coli Heptosyltransferase Waac. |
PDB | 2h1h_B | 0 | 4 | 292 | 3 | 297 | A Chain A, E. Coli Heptosyltransferase Waac. |
PDB | 2h1h_A | 0 | 4 | 292 | 3 | 297 | A Chain A, E. Coli Heptosyltransferase Waac. |
PDB | 2h1f_B | 0 | 4 | 292 | 3 | 297 | A Chain A, E. Coli Heptosyltransferase Waac With Adp |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FG602399 | 224 | 78 | 283 | 2e-28 |
GW454134 | 82 | 4 | 85 | 1e-17 |
GW436820 | 77 | 4 | 80 | 8e-16 |
GW454753 | 42 | 4 | 45 | 0.000001 |
FS962858 | 42 | 239 | 280 | 0.003 |
Orthologous Group | |||||
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Species | ID | ||||
Picea abies | MA_159042g1060 | ||||
Ricinus communis | 27698.m000066 |
Sequence Alignments (This image is cropped. Click for full image.) |
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