| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10024995m |
| Family | CBM22 |
| Protein Properties | Length: 497 Molecular Weight: 56728.6 Isoelectric Point: 9.8094 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2622355 End: 2624820 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM22 | 45 | 160 | 6.1e-21 |
| IIVNPDLRNGPQAWSQFGNAKVEFREIGGDKFVVARERKQPFDSVSQKVYLEKGLLYTFSAWLQVNKGNAPVKAVFKKNGEYKHAGSVIAESKCWSMLKG GLTVDESGPAELYFES | |||
| GH10 | 219 | 458 | 0 |
| QRKLGFPFGCEVEKNILESQAYQNWFTQRFTVTTFANEMKWYSTEVVRGKENYSIADAMLSFFKKHGVAVRGHNVVWNDDKYQLQWLNSLSGREFYNAVK QRIFSVVSRYKGQLAGWDVVNENLHFSYFEKKMGPKASYNIYKMAQAFDPTTTKFLNEYNTLEEPRDSDSCPARYLKKLRELKSIRVRGNISLGIGLESH FKTPNLPYMRSALDTLGATGLPIWLTEVDVEAPPNVQAQV | |||
| Full Sequence |
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| Protein Sequence Length: 497 Download |
| MKRLLLLALC SLSLSRSESK FVPYDYSATI ECLAKPFKPQ YNGGIIVNPD LRNGPQAWSQ 60 FGNAKVEFRE IGGDKFVVAR ERKQPFDSVS QKVYLEKGLL YTFSAWLQVN KGNAPVKAVF 120 KKNGEYKHAG SVIAESKCWS MLKGGLTVDE SGPAELYFES DDTTVEIWVD SVSLQPFTEK 180 EWNTHHELSI QKERKRTVRI RAVNSKGEPI PKATITVEQR KLGFPFGCEV EKNILESQAY 240 QNWFTQRFTV TTFANEMKWY STEVVRGKEN YSIADAMLSF FKKHGVAVRG HNVVWNDDKY 300 QLQWLNSLSG REFYNAVKQR IFSVVSRYKG QLAGWDVVNE NLHFSYFEKK MGPKASYNIY 360 KMAQAFDPTT TKFLNEYNTL EEPRDSDSCP ARYLKKLREL KSIRVRGNIS LGIGLESHFK 420 TPNLPYMRSA LDTLGATGLP IWLTEVDVEA PPNVQAQVFR AGSKGRPRTS SSERNGDVEW 480 LFSNRLLPNV PHRWKL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 0.001 | 43 | 163 | 132 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 3.0e-32 | 248 | 448 | 212 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-41 | 224 | 461 | 250 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 4.0e-65 | 257 | 456 | 213 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA19866.1 | 0 | 25 | 480 | 119 | 572 | putative protein [Arabidopsis thaliana] |
| EMBL | CAA19868.1 | 0 | 36 | 459 | 22 | 458 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_195109.2 | 0 | 8 | 462 | 10 | 468 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_195110.3 | 0 | 15 | 480 | 16 | 479 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | NP_195112.2 | 0 | 16 | 459 | 17 | 460 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xas_A | 2e-23 | 212 | 452 | 2 | 243 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
| PDB | 1nq6_A | 7e-23 | 226 | 456 | 15 | 246 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0n_A | 9e-23 | 212 | 452 | 2 | 243 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0m_A | 9e-23 | 212 | 452 | 2 | 243 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0l_A | 9e-23 | 212 | 452 | 2 | 243 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
