| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna10336.1-v1.0-hybrid |
| Family | CBM43 |
| Protein Properties | Length: 177 Molecular Weight: 18564 Isoelectric Point: 8.379 |
| Chromosome | Chromosome/Scaffold: 6 Start: 32193511 End: 32194295 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 92 | 171 | 2.1e-21 |
| WCIAKGGIPKTLLKNDFDSLCKEVDCSPTNGTGLCYTESIFAKASFAMNLKYQKNGKKDADCVYEGRAETTTKDPSWGKC | |||
| Full Sequence |
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| Protein Sequence Length: 177 Download |
| METKSIIVSL LILQLAVTAF SKGGHKGKGG GGHHRDQNPM HQPHGSHKDV HEPGGPAGGI 60 AKPGSKPQVE FGGVDEQFAP SSGGDASGDK KWCIAKGGIP KTLLKNDFDS LCKEVDCSPT 120 NGTGLCYTES IFAKASFAMN LKYQKNGKKD ADCVYEGRAE TTTKDPSWGK CIMVSS* 180 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-10 | 91 | 159 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-19 | 91 | 172 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.0000000009 | 91 | 175 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Signal Peptide |
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| Cleavage Site |
| 21 |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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