| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna28256.1-v1.0-hybrid |
| Family | CBM43 |
| Protein Properties | Length: 164 Molecular Weight: 16916.3 Isoelectric Point: 7.7468 |
| Chromosome | Chromosome/Scaffold: 3 Start: 20999260 End: 21000025 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 79 | 158 | 1.6e-21 |
| WCIGKKDILTSLLKTAFDEICKEVDCSPTGPTGICYDESIWSKASYAMNLKYQKNGQKDSDCDNQGTSHIVTIDPSWGKC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 164 Download |
| MAPNFFVASV LLLQLAAIAF SIRLPYYPPR PDKGIPGGPA LGLPGGPAAG IPTQQEGPAG 60 GSTTAPGAAV GGANSGKKWC IGKKDILTSL LKTAFDEICK EVDCSPTGPT GICYDESIWS 120 KASYAMNLKY QKNGQKDSDC DNQGTSHIVT IDPSWGKCVL ISS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 6.0e-11 | 78 | 145 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-22 | 78 | 159 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.0000000005 | 78 | 162 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Transmembrane Domains | |
|---|---|
 | |
| Start | End |
| 5 | 27 |
| Signal Peptide |
|---|
 |
| Cleavage Site |
| 21 |
| Hydropathy |
|---|
 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |