Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 27810.m000644 |
Family | GT47 |
Protein Properties | Length: 728 Molecular Weight: 83481.4 Isoelectric Point: 6.3021 |
Chromosome | Chromosome/Scaffold: 27810 Start: 147939 End: 156312 |
Description | exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 298 | 635 | 0 |
RPLIYGRHFKFECVNRIYDGRNATIWTDHLYGAQMALYESLLASPYRTLNGEEADFFFVPILDSCIITRADDAPHLSMQDHMGLRSSLTLEYYRKAYDHI VEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDKISSDRRGRHPCFDPDKDLVLPAWKRPDVSALSTKLWAR PLERRKTLFFFNGNLGPAYPNGRPELSYSMGIRQKLAEEFGSSPNKDGKLGKQHAEDVIVTPLRSENYHEDLASSIFCGVLPGDGWSGRMEDSILQGCIP VIIQDGIFLPYENVLNYESFAVRIREDEISNLLKILRG |
Full Sequence |
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Protein Sequence Length: 728 Download |
MNLKEKEDEG NTVLENLLPT VALDHRFPVD SHKGVVYRDA PWKAEVGQWL SGCDSITKEV 60 KVVEIIGGRT CKNDCSGQGV CNHELGECRC FHGFSGEECS EKLQLECNYP KTPELPYGRW 120 VVSICPAYCD TTRAMCFCGE GTKYPNRPVA EACGFQVNLP SESGGPKLTD WGKADLDNIF 180 TTNKSKLGWC NVDPHEAYAS KVKFKEECDC KYDGLFGRFC EVPVQSICIN QCSGHGYCRG 240 GFCQCDNGWY GTDCSIPSVV SSVSEWPQWL RPALLDVPDN SHVIQKLVNL NAVVEKKRPL 300 IYGRHFKFEC VNRIYDGRNA TIWTDHLYGA QMALYESLLA SPYRTLNGEE ADFFFVPILD 360 SCIITRADDA PHLSMQDHMG LRSSLTLEYY RKAYDHIVEH YPYWNRTSGR DHIWFFSWDE 420 GACYAPKEIW NSMMLVHWGN TNSKHNHSTT AYWADNWDKI SSDRRGRHPC FDPDKDLVLP 480 AWKRPDVSAL STKLWARPLE RRKTLFFFNG NLGPAYPNGR PELSYSMGIR QKLAEEFGSS 540 PNKDGKLGKQ HAEDVIVTPL RSENYHEDLA SSIFCGVLPG DGWSGRMEDS ILQGCIPVII 600 QDGIFLPYEN VLNYESFAVR IREDEISNLL KILRGFNETE KEFKLANVRK IWQRFLYRDT 660 VLLEAKRQKT AFGHEEDWEV EFLQLVNDDV FTTFIQILHY KLHNDPWRRQ LSHLKKDFGL 720 PQECLRTN |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07974 | EGF_2 | 0.0004 | 230 | 254 | 27 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
pfam03016 | Exostosin | 8.0e-62 | 314 | 636 | 324 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80640.1 | 0 | 15 | 719 | 66 | 809 | hypothetical protein [Vitis vinifera] |
EMBL | CBI29877.1 | 0 | 15 | 725 | 94 | 818 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277596.1 | 0 | 15 | 725 | 66 | 790 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 16 | 725 | 67 | 789 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526728.1 | 0 | 1 | 728 | 1 | 728 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV125386 | 242 | 382 | 623 | 0 |
EH756685 | 261 | 337 | 597 | 0 |
EY104701 | 255 | 369 | 623 | 0 |
HO782792 | 315 | 424 | 727 | 0 |
GO884759 | 324 | 288 | 593 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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