Basic Information | |
---|---|
Species | Chlamydomonas reinhardtii |
Cazyme ID | Cre10.g430250.t1.2 |
Family | GT47 |
Protein Properties | Length: 581 Molecular Weight: 64843.7 Isoelectric Point: 6.6313 |
Chromosome | Chromosome/Scaffold: 10 Start: 1696543 End: 1702374 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 140 | 443 | 9.79999e-40 |
DSIKIYVYELPPNVTSWFNIKRLDRPLHLLFWQRLMSAGLRTVNGDEADYFFIPLNTRTLMAPEQAAWILPYIRNTWPYWDRDNGHRHLIIHTGDMGLHE LPLGLRRKMNETLSNITWLTHWGLHTYHPIGTWFPAHRPGKDIVIPVMITTPGFQLSPLNPAVAEKAAKRGRPYTREQTFFFAGRICGDRKPPDPLTHEC APKRTDYSASVRQRVYFHHHNRTGFKVLTGTSKYMQEITSHKFCLAPTGGGHGKRQVLVALMGCIPVTITDGVYQPFEPELPWADFSVPVAEDDIPRLHE VLEA |
Full Sequence |
---|
Protein Sequence Length: 581 Download |
MLDEDADEGT NLDDSDSGEG PSLADAVAAR VVNSTCAPGC SEHGVCNEEL GRCDCPRHFV 60 GPDCQTPNPE VSDVCAKYGF TVSQCRGASP CFNSCNGRGR CVAGVCHCLP GFWGMDCALS 120 RGADGSVQLL EGQGYVPRKD SIKIYVYELP PNVTSWFNIK RLDRPLHLLF WQRLMSAGLR 180 TVNGDEADYF FIPLNTRTLM APEQAAWILP YIRNTWPYWD RDNGHRHLII HTGDMGLHEL 240 PLGLRRKMNE TLSNITWLTH WGLHTYHPIG TWFPAHRPGK DIVIPVMITT PGFQLSPLNP 300 AVAEKAAKRG RPYTREQTFF FAGRICGDRK PPDPLTHECA PKRTDYSASV RQRVYFHHHN 360 RTGFKVLTGT SKYMQEITSH KFCLAPTGGG HGKRQVLVAL MGCIPVTITD GVYQPFEPEL 420 PWADFSVPVA EDDIPRLHEV LEALPPEQVE QMQSRLHCAA QHMFYSSSLG AIIGEDGRYD 480 AFETMIEILR VRKAHPDVAP DKYVEVDERF RQFANCELGG PDPKTLCAQG MDRQHPDMPT 540 CAECHRQVSA RRTGSSFFSW AGGLVCCSEL DLAKCPRVWE * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07974 | EGF_2 | 0.007 | 40 | 64 | 25 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
pfam03016 | Exostosin | 2.0e-36 | 138 | 443 | 328 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001693540.1 | 0 | 36 | 507 | 5 | 487 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
RefSeq | XP_001702517.1 | 0 | 33 | 491 | 7 | 479 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
RefSeq | XP_001702686.1 | 0 | 1 | 564 | 38 | 601 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
RefSeq | XP_001703124.1 | 0 | 52 | 516 | 9 | 471 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
RefSeq | XP_001703125.1 | 0 | 34 | 508 | 65 | 509 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FD838948 | 279 | 216 | 486 | 0 |
FD833031 | 132 | 32 | 163 | 0 |
BU654073 | 226 | 54 | 277 | 0 |
AV627636 | 174 | 67 | 236 | 0 |
FD821819 | 191 | 393 | 581 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|