Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30170.m014094 |
Family | GT4 |
Protein Properties | Length: 477 Molecular Weight: 53388.2 Isoelectric Point: 10.0819 |
Chromosome | Chromosome/Scaffold: 30170 Start: 2809835 End: 2813089 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 281 | 444 | 4.5e-23 |
LLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLKVPSLHAVVVGSDMNAQTKFEMELRKFVQEKKIQDRVHFVNKTLTVAPYLASIDVLVQNSQARGEC FGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPAGKEGVTPLANNIVKLATHVERRLTMG |
Full Sequence |
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Protein Sequence Length: 477 Download |
MAKQSSAWIT KHKNRWPLMI LAFFTLSTLI VFSIRSASDS CHSSSNITTT ATTANVDRFG 60 EPKVDSKPQI HSSVAPNPLD FMKSKLVLLV SHELSLSGGP LLLMELAFLL RGVGAEVVWI 120 TNQKPTETDE VIYSLENKML DRGVQVFSAK GQKAIDTALK ADLVVLNTAV AGKWLDATLK 180 ESVQQVLPKV LWWIHEMRGH YFKLEYVKHL PFVAGAMIDS HTTAEYWKNR TRERLGIKMP 240 ETYVVHLGNS KDLMEVAEDS VAKRVLCEHV RESLGVRNDD LLFAIINSVS RGKGQDLFLR 300 SFYESLQLIQ EKKLKVPSLH AVVVGSDMNA QTKFEMELRK FVQEKKIQDR VHFVNKTLTV 360 APYLASIDVL VQNSQARGEC FGRITIEAMA FQLPVLGTAA GGTMEIVVNG TTGLLHPAGK 420 EGVTPLANNI VKLATHVERR LTMGKNGYKR VKERFLEHHM SHRIALVLKE VLRKAKT 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03795 | GT1_like_4 | 2.0e-17 | 315 | 461 | 152 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. | ||
COG0438 | RfaG | 6.0e-18 | 182 | 474 | 295 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
cd03798 | GT1_wlbH_like | 3.0e-20 | 271 | 471 | 205 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
cd03808 | GT1_cap1E_like | 4.0e-23 | 234 | 460 | 228 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
cd03801 | GT1_YqgM_like | 4.0e-31 | 98 | 469 | 390 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN73426.1 | 0 | 1 | 472 | 1 | 470 | hypothetical protein [Vitis vinifera] |
EMBL | CBI19755.1 | 0 | 1 | 476 | 1 | 458 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002281084.1 | 0 | 1 | 476 | 1 | 474 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327680.1 | 0 | 13 | 477 | 20 | 477 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510442.1 | 0 | 1 | 477 | 1 | 477 | glycosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jjm_L | 0.00000000008 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_K | 0.00000000008 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_J | 0.00000000008 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_I | 0.00000000008 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_H | 0.00000000008 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |