Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10011469 |
Family | GT4 |
Protein Properties | Length: 680 Molecular Weight: 76285.9 Isoelectric Point: 10.3997 |
Chromosome | Chromosome/Scaffold: 1578 Start: 258583 End: 261315 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 461 | 649 | 4.7e-25 |
DMLVMSLSSINPGKGQLLLLESAKMLAEPEDSLSSLADKHHLRSLLQGQQHHTGVARKSVLKVLVGSVGSKSNKIPYVKEILEFVSQHSNLSKSVLWTPS TTRVASLYSAADVYVINSQGIGETFGRVTIEAMAFGLPVVGTDAGGTKEIVEQNVTGLLHPVGRQGSRVLADNLRYLMKNGEVRKEMGK |
Full Sequence |
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Protein Sequence Length: 680 Download |
MEESIIRPDL HVNVTRQSPL RPNGRATPRN SPTYKRLNSS RTPRRDGRSS GGRLQWFRSS 60 RIVYWLLLIT LWTYLGFYVQ SRWAHDNNKE EFLGFGGRNG VVHSEISEAT VRRDLLGNET 120 SLAVNNKIEV EDGKRIEVSL AKKENEVSSN QTVAPKKKDK KPVRRLRRRA RGRKKAKIED 180 ESNEPEVQEL EIPKRNTSYG LLVGPFGTTE DQILGWSPEK RTGTCDRKGA FARLVWSRKF 240 VLIFHELSMT GAPLSMLELA TELLSCGATV SVVVLSRKGG LMPELSKRRI KVLDDRADLS 300 FKTAMKADIV IAGSAVCTSW IGLVVSFGYL SFLLDVNANV HSSPDQYITR FPAGGSQIVW 360 WIMENRREYF DRSKIVLDRV KMVVFLSESQ SRQWLTWCEG ENIKLRSPPA VVELSVNDEL 420 AFVAGIPCSL NSPSSSPEEM LEKKQLLRSS VRREMGLNDN DMLVMSLSSI NPGKGQLLLL 480 ESAKMLAEPE DSLSSLADKH HLRSLLQGQQ HHTGVARKSV LKVLVGSVGS KSNKIPYVKE 540 ILEFVSQHSN LSKSVLWTPS TTRVASLYSA ADVYVINSQG IGETFGRVTI EAMAFGLPVV 600 GTDAGGTKEI VEQNVTGLLH PVGRQGSRVL ADNLRYLMKN GEVRKEMGKR GREKVVRKYL 660 KKHMYRKFGE LLYKCMQIK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00534 | Glycos_transf_1 | 1.0e-19 | 550 | 653 | 106 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
TIGR00009 | L28 | 2.0e-20 | 564 | 657 | 94 | + ribosomal protein L28. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture and are not included [Protein synthesis, Ribosomal proteins: synthesis and modification]. | ||
TIGR00072 | hydrog_prot | 5.0e-22 | 539 | 668 | 131 | + hydrogenase maturation protease. HycI and HoxM are well-characterized as responsible for C-terminal protease activity on their respective hydrogenase large chains. A large number of homologous proteins appear responsible for the maturation of various forms of hydrogenase. | ||
cd03808 | GT1_cap1E_like | 5.0e-24 | 550 | 667 | 118 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
cd03801 | GT1_YqgM_like | 2.0e-29 | 450 | 673 | 226 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN71826.1 | 0 | 1 | 679 | 1 | 734 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36173.1 | 0 | 1 | 679 | 1 | 683 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284822.1 | 0 | 16 | 679 | 5 | 691 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298139.1 | 0 | 1 | 679 | 1 | 681 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528176.1 | 0 | 1 | 679 | 1 | 686 | glycosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jjm_L | 0.000000000008 | 536 | 677 | 251 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_K | 0.000000000008 | 536 | 677 | 251 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_J | 0.000000000008 | 536 | 677 | 251 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_I | 0.000000000008 | 536 | 677 | 251 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_H | 0.000000000008 | 536 | 677 | 251 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |