CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10000369m
FamilyGH85
Protein PropertiesLength: 688 Molecular Weight: 77104.5 Isoelectric Point: 6.439
ChromosomeChromosome/Scaffold: 6 Start: 1589631 End: 1593146
DescriptionGlycosyl hydrolase family 85
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH85783590
  MKGGYVDDKWVQGCGNNAGYAIWNWYLMDVFVYFSHSLVTLPPPCWTNTAHRHGVKVLGTFITEWDEGKATCKELLATKESAQMYAERLAELAAALGFDG
  WLINIENVIDEVQIPNLLVFVSHLTKVMHSSVPGGLVIWYDSVTVHGLLEWQDQLTDNNKPFFDICDGIFMNYTWKENYPKASAKIAGDRKYDVYMGIDV
  FGRGTYGGGQWTANVALDLLKRNNVSAAVFAPGWVYETEQPPDFHTAQNKWWSLVEKSWGIVQTYPQVLPFYSDFNQGLGSH
Full Sequence
Protein Sequence     Length: 688     Download
MSKSNEAAML VAPSPPPPPF DPTKPSTPIS FPIKTLQDLK SRSYFDSFHF SFNRSSVALR    60
RNIGVLPDRS RLLVCHDMKG GYVDDKWVQG CGNNAGYAIW NWYLMDVFVY FSHSLVTLPP    120
PCWTNTAHRH GVKVLGTFIT EWDEGKATCK ELLATKESAQ MYAERLAELA AALGFDGWLI    180
NIENVIDEVQ IPNLLVFVSH LTKVMHSSVP GGLVIWYDSV TVHGLLEWQD QLTDNNKPFF    240
DICDGIFMNY TWKENYPKAS AKIAGDRKYD VYMGIDVFGR GTYGGGQWTA NVALDLLKRN    300
NVSAAVFAPG WVYETEQPPD FHTAQNKWWS LVEKSWGIVQ TYPQVLPFYS DFNQGLGSHI    360
SLGGKILSDA PWYNISCQSL QPLLEFHEGK NSDIMQVTVD GGEASYNGGG NVSFRGKLQR    420
NAHFTARLFK PHLELPASPI SISFSVKSDK RSELSILLHF SSPSHEKKSF LMAPNESSNR    480
FGDMFLPCHV TSTQTTSDWM VHETNLVLDG HTLSEISAFC SRPDDLTEET NTLEYFALLG    540
HISIKSQQKT KLFPLASSWV IEAHHIKFVP GDSGSKTLSC KLEWRLKHPE EDIAFTRYNV    600
YAENLKSSEY RARKVMEEPR SEKVFLGTAH VDAYYVSGLV VGSDLKGVRF VVQTCGEDGT    660
WQELDHSPNL LVEVERPSSK LCCCGLI* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00598GH18_chitinase-like0.000480250184+
COG4724COG47242.0e-3252519514+
pfam03644Glyco_hydro_854.0e-11978359301+
cd06547GH85_ENGase6.0e-13573386334+
Gene Ontology
GO TermDescription
GO:0005737cytoplasm
GO:0033925mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAB09989.102367616620unnamed protein product [Arabidopsis thaliana]
RefSeqNP_187715.1016751694glycosyl hydrolase family 85 protein [Arabidopsis thaliana]
RefSeqNP_196165.302368716680hydrolase, acting on glycosyl bonds / mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Arabidopsis thaliana]
RefSeqXP_002273683.10106756688PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002520784.1016751685endo beta n-acetylglucosaminidase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3fha_D2e-3010265784604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_C2e-3010265784604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_B2e-3010265784604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_A2e-3010265784604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fhq_F2e-3010265784604A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EV1182252371063420
EV1603082451203640
JG6212242711223910
EL437937257973530
GE5414562681914580
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00225.1
Arabidopsis lyrata497439.76.201497439.76.201872478497439.204.302487338
497439.204.302
Arabidopsis thalianaAT5G05460.1AT3G11040.1
Brachypodium distachyonBradi1g14127.1
Brassica rapaBra034160Bra005854
Carica papayaevm.model.supercontig_19.130
Capsella rubellaCarubv10013078m
Chlamydomonas reinhardtiiCre13.g582250.t1.2
Citrus clementinaCiclev10031026m.70.259Ciclev10031026m.70.259Ciclev10030777m
Cucumis sativusCucsa.144380.1Cucsa.144370.1
Eucalyptus grandisEucgr.J00174.1
Fragaria vescamrna21040.1-v1.0-hybrid
Glycine maxGlyma14g06120.2Glyma18g40011.1Glyma02g43025.1Glyma11g35630.1Glyma14g06130.1
Glyma14g06120.1Glyma18g02770.1Glyma02g43020.2
Gossypium raimondiiGorai.012G079500.1Gorai.011G290600.1
Linum usitatissimumLus10017430Lus10007526
Manihot esculentacassava4.1_029708mcassava4.1_031267m
Medicago truncatulaMedtr3g071610.1
Mimulus guttatusmgv1a002327mmgv1a001722m
Oryza sativaLOC_Os05g27960.1
Physcomitrella patensPp1s13_33V6.2Pp1s13_33V6.1
Phaseolus vulgarisPhvul.001G245900.1
Picea abiesMA_10436931g0010MA_10435721g0010
Populus trichocarpaPotri.008G073000.1Potri.010G184300.1Potri.010G184300.2Potri.010G184200.1Potri.010G184200.2
Prunus persicappa015834m
Ricinus communis29729.m00228229729.m002279
Setaria italicaSi021368m
Selaginella moellendorffii61572
Sorghum bicolorSb09g016230.1
Thellungiella halophilaThhalv10012879mThhalv10020200m
Vitis viniferaGSVIVT01032751001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny