CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb09g016230.1
FamilyGH85
Protein PropertiesLength: 686 Molecular Weight: 76448.8 Isoelectric Point: 4.9835
ChromosomeChromosome/Scaffold: 9 Start: 40887900 End: 40894021
DescriptionGlycosyl hydrolase family 85
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH85862980
  MQGGYRDDAAPQGGANPDAYALWHWHLVDVFVYFSHYLVTLPPPCWINAAHIHGVKVLGTFITEWDKGVEVCKEMLATEASAQMYAERLTELAHTLGFDG
  WLINIEVKLDVQFIDNLKEFVKHLTTTMHDAVPGSLVIWYDAITVNGDLDWQDKLNKYNKPFFDVCDGLFSNYTWKENYPQDSATLAGDRKYDVYMGIDV
  FGRNTFGGGQWTL
Full Sequence
Protein Sequence     Length: 686     Download
MLPSAAEVSV GNTAAAGDDR RAWEPPFDAS SPAPPISYPI TDLAALASRA YLSAEANFHL    60
PFNRASVPAP ASPLPQRRRV LVCHDMQGGY RDDAAPQGGA NPDAYALWHW HLVDVFVYFS    120
HYLVTLPPPC WINAAHIHGV KVLGTFITEW DKGVEVCKEM LATEASAQMY AERLTELAHT    180
LGFDGWLINI EVKLDVQFID NLKEFVKHLT TTMHDAVPGS LVIWYDAITV NGDLDWQDKL    240
NKYNKPFFDV CDGLFSNYTW KENYPQDSAT LAGDRKYDVY MGIDVFGRNT FGGGQWTLFA    300
IVAVLLLSWW GLVEKSWGIL RSYPEQLPFY SDFNQGHGYQ VSVEGLQISS DPWNNISCQS    360
FQPMLKYTRD QVHLQAYTDF KDGPYSGGNC LTAKGTLRQN IVFSERIFNG GLALEDGPVH    420
LFYSVRANAN SALGLSLDLS SRNKKGTSIL VAEDIATFTR KKQNHKYGSY VKADKVELHA    480
PDNQDWVLVQ QHSPDNQDWV LCKATVWSSA GYTLTGINIV CTMKITGQIS PETEDGSILE    540
EHVDGSSLYQ ASLGHISIRN TDKNTEFPPA ESWVTEGDYI SWSKSSNGSE LVSLKISWKL    600
KTPDERQPPF SKYNIYVEKL TADSDVKAPR SYLGVASVDA FYVSGLEISN EVTSLKFFIQ    660
AFAHDGSWQE LEECPNFFLS PVHSE* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00598GH18_chitinase-like5.0e-988236171+
COG4724COG47241.0e-3362417423+
pfam03644Glyco_hydro_854.0e-10986343303+
cd06547GH85_ENGase7.0e-11481363330+
Gene Ontology
GO TermDescription
GO:0005737cytoplasm
GO:0033925mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAV43808.1016841694unknown protein [Oryza sativa Japonica Group]
GenBankEAY97626.10163615660hypothetical protein OsI_19549 [Oryza sativa Indica Group]
GenBankEEE63344.10168415708hypothetical protein OsJ_18155 [Oryza sativa Japonica Group]
RefSeqNP_001055263.1016846699Os05g0346500 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002440911.1016851685hypothetical protein SORBIDRAFT_09g016230 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3fha_D2e-256143928464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_C2e-256143928464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_B2e-256143928464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fha_A2e-256143928464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
PDB3fhq_F2e-256143928464A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CN1260952254626860
JG8807702973096050
JG9032652923096000
JG9396642882174750
CB670350243232650
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00225.1
Arabidopsis lyrata497439.76.201497439.76.201872478497439.204.302487338
497439.204.302
Arabidopsis thalianaAT5G05460.1AT3G11040.1
Brachypodium distachyonBradi1g14127.1
Brassica rapaBra034160Bra005854
Carica papayaevm.model.supercontig_19.130
Capsella rubellaCarubv10000369mCarubv10013078m
Chlamydomonas reinhardtiiCre13.g582250.t1.2
Citrus clementinaCiclev10031026m.70.259Ciclev10031026m.70.259Ciclev10030777m
Cucumis sativusCucsa.144380.1Cucsa.144370.1
Eucalyptus grandisEucgr.J00174.1
Fragaria vescamrna21040.1-v1.0-hybrid
Glycine maxGlyma14g06120.2Glyma18g40011.1Glyma02g43025.1Glyma11g35630.1Glyma14g06130.1
Glyma14g06120.1Glyma18g02770.1Glyma02g43020.2
Gossypium raimondiiGorai.012G079500.1Gorai.011G290600.1
Linum usitatissimumLus10017430Lus10007526
Manihot esculentacassava4.1_029708mcassava4.1_031267m
Medicago truncatulaMedtr3g071610.1
Mimulus guttatusmgv1a002327mmgv1a001722m
Oryza sativaLOC_Os05g27960.1
Physcomitrella patensPp1s13_33V6.2Pp1s13_33V6.1
Phaseolus vulgarisPhvul.001G245900.1
Picea abiesMA_10436931g0010MA_10435721g0010
Populus trichocarpaPotri.008G073000.1Potri.010G184300.1Potri.010G184300.2Potri.010G184200.1Potri.010G184200.2
Prunus persicappa015834m
Ricinus communis29729.m00228229729.m002279
Setaria italicaSi021368m
Selaginella moellendorffii61572
Thellungiella halophilaThhalv10012879mThhalv10020200m
Vitis viniferaGSVIVT01032751001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny