| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10004509m |
| Family | GH127 |
| Protein Properties | Length: 654 Molecular Weight: 73014.1 Isoelectric Point: 4.898 |
| Chromosome | Chromosome/Scaffold: 9 Start: 27573432 End: 27578714 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH127 | 174 | 451 | 5.3e-25 |
| VTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIY LLPLAPGSSKERSYHHWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLT TSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYV | |||
| Full Sequence |
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| Protein Sequence Length: 654 Download |
| MWASTHNESL KEKMSAVVSA LSACQKETGS GYLSAFPTEQ FDRLEALIPV WAPYYTIHKI 60 LAGLLDQYTY ADNAEALRMT TWMVEYFYNR VQNVIKKYSI ERHWQTLNEE AGGMNDVLYK 120 LFSITQDPKH LMLAHLFDKP CFLGLLALQA DDISGFHSNT HIPIVIGSQM RYEVTGDQLH 180 KTISMFFMDI VNSSHTYATG GTSVGEFWSD PKRLASNLDS NTEESCTTYN MLKVSRHLFR 240 WTKEIAYADY YERSLTNGVL GIQRGTEPGV MIYLLPLAPG SSKERSYHHW GTPFDSFWCC 300 YGTGIESFSK LGDSIYFEEE GKYPGVYIIQ YISSRLDWKS GQIVVNQKVD PVVSWDPYLR 360 VTLTFSSKGS GLTTSLNLRI PTWTSSNGAK ATLNGQDLPL PSPGNFLSVT KTWSSDDKLT 420 IQLPLTLRTE AIQDDRPEYA SIQAILYGPY VLAGHSIGDW DITKSATSLS DWITPIPASY 480 NSQLITFTQE YGNTKFTHLN DSSGSEFSSL NDFIGKSVML EPFDSPGMLV IQHETDDELV 540 VTDSFIAQGS SVFHLVAGLD GGDRTVSLES ETYKGCFVYT AFNLQSSEST KLGCISESTE 600 AGFNNAASFV IEKGLSEYHP ISFVAKGANR NFLLAPLLSL RDESYSVYFD FQS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 1.0e-53 | 1 | 454 | 456 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 1.0e-138 | 1 | 453 | 459 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16424.1 | 0 | 1 | 653 | 49 | 733 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283032.1 | 0 | 1 | 653 | 256 | 940 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285548.1 | 0 | 1 | 652 | 181 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 1 | 653 | 176 | 858 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 1 | 652 | 176 | 857 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY711378 | 257 | 65 | 321 | 0 |
| EY732172 | 256 | 211 | 466 | 0 |
| GO843439 | 349 | 124 | 472 | 0 |
| JK989006 | 318 | 164 | 478 | 0 |
| EY711378 | 46 | 310 | 355 | 0.028 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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