| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G206000.1 |
| Family | GH127 |
| Protein Properties | Length: 865 Molecular Weight: 96381 Isoelectric Point: 6.6926 |
| Chromosome | Chromosome/Scaffold: 03 Start: 20684395 End: 20689757 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH127 | 347 | 631 | 8e-23 |
| IGAQMRYEITGDPLYKDIGAFFMDVVNSSHSYATGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHLFRWTKEMAYADYYERALTNGVLGIQRG TEPGVMIYMLPQYPGSSKAKSYHGWGTSYDSFWCCYGTGIESFSKLGDSIYFEEGEAPGLYIIQYISSSLDWKSGQIVLNQKVDPIVSSDPYLRVTLTFS PKKGTSQASTLYLRIPIWTNSEGATATINSQSLRLPAPGSFLSVNRKWRSSDKLTLQIPISLRTEAIKDDRHEYASVQAILYGPY | |||
| Full Sequence |
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| Protein Sequence Length: 865 Download |
| MQMEKEMNGL LVLAMVSMLC SFGISKECTN IPTQLSSHSF RYELLSSQNE TWKEEMFEHY 60 HLIPTDDSAW SSLLPRKILR EEDEHSWEMM YRNLKSPLKS SGNFLNEMSL HNVRLDPSSI 120 HWKAQQTNLE YLLMLDVNNL VWSFRKTAGS STPGKAYGGW EKPDSELRGH FVGHYLSASA 180 QMWASTHNET LKKKMSAVVS ALSACQVKMG TGYLSAFPSE LFDRFEAIKP VWAPYYTIHK 240 ILAGLLDQYT LADNAQALKM VKWMVDYFYN RVRNVITNYS VERHYLSLNE ETGGMNDVLY 300 KLFSITGDPK HLVLAHLFDK PCFLGLLAVQ ADDISGFHAN THIPVVIGAQ MRYEITGDPL 360 YKDIGAFFMD VVNSSHSYAT GGTSVSEFWS DPKRLASTLQ TENEESCTTY NMLKVSRHLF 420 RWTKEMAYAD YYERALTNGV LGIQRGTEPG VMIYMLPQYP GSSKAKSYHG WGTSYDSFWC 480 CYGTGIESFS KLGDSIYFEE GEAPGLYIIQ YISSSLDWKS GQIVLNQKVD PIVSSDPYLR 540 VTLTFSPKKG TSQASTLYLR IPIWTNSEGA TATINSQSLR LPAPGSFLSV NRKWRSSDKL 600 TLQIPISLRT EAIKDDRHEY ASVQAILYGP YLLAGHTSGD WNLKSGSGNS LSDSITPIPG 660 SYNGQLVSFS QESGISTFVL TNSNQSISME KLPESGTDAS LQATFRLVFK DSSSSKLSSV 720 KDVIGKSVML EPFHLPGMLL VQQGKDRSFA LTNSADDDGS SIFRVVPGLD GKDGTVSLES 780 GIQNGCYVYS GVDYKSGQSM KLSCKSGTSS DTGFNQGASF VMNKGLSQYH PISFVAKGDN 840 RNFLLAPLHS LRDESYTIYF NIQP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 8.0e-69 | 110 | 640 | 536 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 4.0e-168 | 112 | 634 | 533 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16413.1 | 0 | 7 | 752 | 6 | 749 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283032.1 | 0 | 7 | 863 | 80 | 939 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285548.1 | 0 | 7 | 863 | 6 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 7 | 863 | 1 | 857 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 7 | 864 | 1 | 858 | predicted protein [Populus trichocarpa] |
