| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10018011m |
| Family | GH127 |
| Protein Properties | Length: 737 Molecular Weight: 81914.9 Isoelectric Point: 6.749 |
| Chromosome | Chromosome/Scaffold: 2 Start: 7497785 End: 7501244 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH127 | 200 | 498 | 3.1e-24 |
| NIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYY ERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSSFDWKAGQTVIHQNVDP VVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGAKATLNKDNLQIPSPGNFLSVTREWSPDDKLFIQLPINLRTEAIKDDRPQYASLQAIFYGP | |||
| Full Sequence |
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| Protein Sequence Length: 737 Download |
| MLDVARLVWS FRKTASLPTP GAPYGGWEDQ KMELRGHFLG HYLSATAMAW ASTRNETVKQ 60 KMDAVMSVLS ECQKKIGTGY LSAFPSEFFD RLENLVYVWA PYYTIHKIMA GLLDQYTLAN 120 NGQALNITIW MADYFNTRVQ NLIARSSLER HYQTLNDESG GMNDVLYKLY GITKDPKHLK 180 LAELFDKPCF LGLLAVKADN IAGLHANTHI PLVCGVQNRY ELTGDEQSMA MGTFFMDIIN 240 SSHSYATGGT SHQEFWTDPK RIATALSAET EESCTTYNML KVSRYLFKWT KQVTYADYYE 300 RALTNGVLGI QRGTEPGVMI YMLPLSPGSS KAKSYHGWGD AFDSFWCCYG TGIESFAKLG 360 DSIYFEQEGK GPGVYIIQYI SSSFDWKAGQ TVIHQNVDPV VSWDQNLRMA LTFTSNKGPG 420 VSSVLNLRIP FWANPNGAKA TLNKDNLQIP SPGNFLSVTR EWSPDDKLFI QLPINLRTEA 480 IKDDRPQYAS LQAIFYGPYL LAGNSQHDHE IKTGSVKSLS EWITPIPASY NAGLVTFSQK 540 SGNSSLVLMK NQSVTMEPWP AAGTGDDANA TFRLIGNDQR PINFTTVKDV VGKQVMLEPF 600 DFPGKLLMQQ GNNDSLVIAN NPGNSVFQVN AGLDGKPDTV SLESVSRKGC FVFSDVNLKA 660 GTALKLNCQQ PDDGFKQAAS FVMQKGISQY HPISFLAKGS NRNYLLAPLL SFRDESYSVY 720 FNITIEKFGQ EATIFE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 2.0e-64 | 2 | 526 | 535 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 4.0e-151 | 1 | 502 | 512 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16424.1 | 0 | 1 | 723 | 1 | 731 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283032.1 | 0 | 1 | 723 | 208 | 938 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285548.1 | 0 | 1 | 723 | 133 | 862 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 1 | 723 | 128 | 856 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 1 | 723 | 128 | 856 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO843439 | 351 | 172 | 522 | 0 |
| JK989006 | 318 | 212 | 528 | 0 |
| HO781092 | 415 | 301 | 707 | 0 |
| DR925547 | 294 | 183 | 476 | 0 |
| HO781092 | 24 | 700 | 723 | 3.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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