| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10033306m |
| Family | GH37 |
| Protein Properties | Length: 579 Molecular Weight: 65160.8 Isoelectric Point: 6.3877 |
| Chromosome | Chromosome/Scaffold: 4 Start: 11940408 End: 11943644 |
| Description | trehalase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH37 | 48 | 566 | 0 |
| DPKLYVDLSLKSNLSTTVTAFHKLPRNATGSVLVPDFKEFLHEYFDGEGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSILN RPEFHTLLPLPRPFVIPGSRFTEVYYWDSYWVIRGLLASKMYMTAKAIVANLISLIDTYGYVLNCARAYCTNRSQPPLLSAMVYDIYNRTGDLDLVKKAL SALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRPESSTIDKAHASKLLNAYEKEQFYRELASTAESGWDFSTRWMRNTSDFTTLAITSILPVD LNIFILKMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNEEKGQWLDYWISNGTSSQYTEVGERMQKLKGSNQSNNAFASNFVPIWIDLFNSDT CIVEKVKKSFQSSGLLGAAGIATSWTRSGEQWDFPNGWAPLQHMIVEGLAKSGSQEAKSIAQDITMRWINSNYVAYKETGAMHEKYDVEKCGDIGGGGEY IPHTGFGWSNGVVLAFLEE | |||
| Full Sequence |
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| Protein Sequence Length: 579 Download |
| SGTVAKAISQ PTTGNFDRGP VVPTTPLVTF LERVQETALA TFEQKDFDPK LYVDLSLKSN 60 LSTTVTAFHK LPRNATGSVL VPDFKEFLHE YFDGEGDDLV YAEPPDFVPE PDGFLPKVKN 120 PQVRAWALEV HALWKNLSRR VSGSILNRPE FHTLLPLPRP FVIPGSRFTE VYYWDSYWVI 180 RGLLASKMYM TAKAIVANLI SLIDTYGYVL NCARAYCTNR SQPPLLSAMV YDIYNRTGDL 240 DLVKKALSAL LKEHQFWNSG IHKVNIQEDH GRNHTLSRYY GMWNKLRPES STIDKAHASK 300 LLNAYEKEQF YRELASTAES GWDFSTRWMR NTSDFTTLAI TSILPVDLNI FILKMELDIA 360 SMAQIVGDNR TAESFLKAAQ ARKQAINSVF WNEEKGQWLD YWISNGTSSQ YTEVGERMQK 420 LKGSNQSNNA FASNFVPIWI DLFNSDTCIV EKVKKSFQSS GLLGAAGIAT SWTRSGEQWD 480 FPNGWAPLQH MIVEGLAKSG SQEAKSIAQD ITMRWINSNY VAYKETGAMH EKYDVEKCGD 540 IGGGGEYIPH TGFGWSNGVV LAFLEEFGWP EDLKISCN* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13270 | treF | 5.0e-76 | 118 | 570 | 467 | + trehalase; Provisional | ||
| PRK13271 | treA | 2.0e-84 | 130 | 565 | 442 | + trehalase; Provisional | ||
| COG1626 | TreA | 2.0e-93 | 128 | 571 | 459 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| PLN02567 | PLN02567 | 0 | 21 | 577 | 559 | + alpha,alpha-trehalase | ||
| pfam01204 | Trehalase | 0 | 47 | 568 | 529 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002263698.1 | 0 | 20 | 577 | 12 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303674.1 | 0 | 21 | 577 | 17 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303675.1 | 0 | 19 | 577 | 15 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518875.1 | 0 | 19 | 577 | 14 | 567 | alpha,alpha-trehalase, putative [Ricinus communis] |
| RefSeq | XP_002523413.1 | 0 | 21 | 577 | 16 | 566 | alpha,alpha-trehalase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wyn_D | 0 | 121 | 565 | 80 | 500 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 2wyn_C | 0 | 121 | 565 | 80 | 500 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 2wyn_B | 0 | 121 | 565 | 80 | 500 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 2wyn_A | 0 | 121 | 565 | 80 | 500 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 2jjb_D | 0 | 121 | 565 | 80 | 500 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY759526 | 256 | 1 | 256 | 0 |
| FC926493 | 252 | 327 | 578 | 0 |
| DY262370 | 252 | 327 | 578 | 0 |
| DT571282 | 297 | 5 | 301 | 0 |
| CV705916 | 229 | 1 | 229 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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