| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb01g031280.1 |
| Family | GH37 |
| Protein Properties | Length: 587 Molecular Weight: 64897.9 Isoelectric Point: 6.1412 |
| Chromosome | Chromosome/Scaffold: 1 Start: 53848293 End: 53852473 |
| Description | trehalase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH37 | 72 | 567 | 0 |
| DPKFYVDLPLATDERAADAALAALPRHPAPSRAELDDFLSRHFGDPGTDLVDADPPDFDAEPRGFLPRVHSPEARAWALEVHALWKQLARRVAPDVAARP DRHTLLPLPGGVVVPGSRFREVYYWDSYWVVRGLLVSKMYDTAKAIVLNLVYMLEKYGFVPNGARSYYINRSQPPLLSSMVLEVYRATRDVEFVRTVFPS LLKEHSFWMSDIHNVAIADNHGQDEELASKVNSMAAKEKLYREIASTAESGWDFSSRWMRNSTDMTTLATTYIIPVDLNIFIFKMELDIGALAKLVGDSA TSEKFLRASKARHIAIDSILWNSEMEQWLDYWLPADADCQGVHEWKTNSQNRNIFASNFIPLWLNAYHSGLVRFADEAKSKRVMASLKASGLLHAAGIAT SLINTGQQWDFPNGWAPLQHLIAEGLSHSGLSEAKKLAEDIATRWVRTNYAAYKSTGAMHEKYNVTACGESGGGGEYKPQTGFGWSNGVVLSFLEE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 587 Download |
| MAGPGFLLQL QPHHVLLLLL VLPCLLPCLR ATTEMAPTAA AGGSDEGASA LLGLLQRVQS 60 EALRVLGPHD FDPKFYVDLP LATDERAADA ALAALPRHPA PSRAELDDFL SRHFGDPGTD 120 LVDADPPDFD AEPRGFLPRV HSPEARAWAL EVHALWKQLA RRVAPDVAAR PDRHTLLPLP 180 GGVVVPGSRF REVYYWDSYW VVRGLLVSKM YDTAKAIVLN LVYMLEKYGF VPNGARSYYI 240 NRSQPPLLSS MVLEVYRATR DVEFVRTVFP SLLKEHSFWM SDIHNVAIAD NHGQDEELAS 300 KVNSMAAKEK LYREIASTAE SGWDFSSRWM RNSTDMTTLA TTYIIPVDLN IFIFKMELDI 360 GALAKLVGDS ATSEKFLRAS KARHIAIDSI LWNSEMEQWL DYWLPADADC QGVHEWKTNS 420 QNRNIFASNF IPLWLNAYHS GLVRFADEAK SKRVMASLKA SGLLHAAGIA TSLINTGQQW 480 DFPNGWAPLQ HLIAEGLSHS GLSEAKKLAE DIATRWVRTN YAAYKSTGAM HEKYNVTACG 540 ESGGGGEYKP QTGFGWSNGV VLSFLEEFGW PEDKEIACSG KVLTTG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13270 | treF | 1.0e-73 | 189 | 571 | 411 | + trehalase; Provisional | ||
| PRK13271 | treA | 4.0e-80 | 189 | 566 | 404 | + trehalase; Provisional | ||
| COG1626 | TreA | 2.0e-86 | 189 | 572 | 416 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| PLN02567 | PLN02567 | 0 | 56 | 578 | 549 | + alpha,alpha-trehalase | ||
| pfam01204 | Trehalase | 0 | 105 | 569 | 491 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB47896.1 | 0 | 35 | 552 | 1 | 537 | Trehalase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAZ16710.1 | 0 | 106 | 551 | 1 | 447 | hypothetical protein OsJ_32186 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065087.1 | 0 | 35 | 578 | 1 | 563 | Os10g0521000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002303675.1 | 0 | 33 | 578 | 5 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002465049.1 | 0 | 1 | 586 | 1 | 586 | hypothetical protein SORBIDRAFT_01g031280 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wyn_D | 0 | 143 | 566 | 80 | 500 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 2wyn_C | 0 | 143 | 566 | 80 | 500 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 2wyn_B | 0 | 143 | 566 | 80 | 500 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 2wyn_A | 0 | 143 | 566 | 80 | 500 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 2jjb_D | 0 | 143 | 566 | 80 | 500 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose degradation II (trehalase) | TREHALA-RXN | EC-3.2.1.28 | α,α-trehalase |
