| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.001G184700.10 |
| Family | GT1 |
| Protein Properties | Length: 506 Molecular Weight: 55921.6 Isoelectric Point: 6.9506 |
| Chromosome | Chromosome/Scaffold: 01 Start: 29460080 End: 29473490 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 68 | 477 | 0 |
| IVGTRGDVQPFIAIGKRLQEYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSNPSEIPIQRNQMKEIIYSLLPACKEPDPDSGIP FKADAIIANPPAYGHTHVAEALKVPVHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSMIWLGIRDMINDVRKKKLKLRPVTYLSGSQGSDSDVPH GYIWSPHLVPKPKDWGPKIDVVGFCFLDLATNYEPPESLVKWLEAGPEPIYIGFGSLPVQEPERMTQIIVDALEQTGQRGIINKGWGGLGNLAEPKDFVY LLDNVPHDWLFLRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLVGAIKFMLDPKVKERANELAKAMENEDG VTGAVKAFLK | |||
| Full Sequence |
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| Protein Sequence Length: 506 Download |
| MSAQKKLQLL NRIATVKDDG TVEFEVPVDV DPNVLACGLR DEHIEVAEEE SPEADIQCIP 60 PLQVVILIVG TRGDVQPFIA IGKRLQEYGH RVRLATHSNF KEFVLTAGLE FYPLGGDPKV 120 LAGYMVKNKG FLPSNPSEIP IQRNQMKEII YSLLPACKEP DPDSGIPFKA DAIIANPPAY 180 GHTHVAEALK VPVHIFFTMP WTPTSEFPHP LSRVKQPAGY RLSYQIVDSM IWLGIRDMIN 240 DVRKKKLKLR PVTYLSGSQG SDSDVPHGYI WSPHLVPKPK DWGPKIDVVG FCFLDLATNY 300 EPPESLVKWL EAGPEPIYIG FGSLPVQEPE RMTQIIVDAL EQTGQRGIIN KGWGGLGNLA 360 EPKDFVYLLD NVPHDWLFLR CKAVVHHGGA GTTAAGLKAA CPTTIVPFFG DQPFWGERVH 420 ARGVGPPPIP VDEFSLPKLV GAIKFMLDPK VKERANELAK AMENEDGVTG AVKAFLKHLH 480 HKKPEREPSP VQSSLFSISR CFRCS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 3.0e-34 | 64 | 486 | 435 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 6.0e-36 | 64 | 208 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 8.0e-120 | 64 | 478 | 419 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 4 | 505 | 102 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 4 | 505 | 113 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 4 | 505 | 160 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321244.1 | 0 | 4 | 504 | 48 | 552 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521125.1 | 0 | 4 | 505 | 122 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 1e-32 | 62 | 483 | 1 | 385 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3h4i_A | 1e-32 | 62 | 483 | 1 | 385 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 4e-24 | 62 | 459 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 4e-24 | 62 | 459 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 6e-24 | 306 | 484 | 230 | 403 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 71 | 405 | 0 |
| GO883166 | 334 | 25 | 357 | 0 |
| CX664063 | 295 | 161 | 455 | 0 |
| DV466557 | 287 | 181 | 467 | 0 |
| GT046352 | 32 | 398 | 429 | 0.0007 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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