| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g013358m |
| Family | GT1 |
| Protein Properties | Length: 445 Molecular Weight: 49239.9 Isoelectric Point: 8.5401 |
| Chromosome | Chromosome/Scaffold: 00029 Start: 259063 End: 265451 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 3 | 410 | 0 |
| IVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPVQRNQMKEIIYSLLPACRDPDLDSGIA FKADAIIANPPAYGHVHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGFDSDVPH GYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWLEAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDSIY LLDNIPHDWLFLQCKAVVHHGGAGTTAAGLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELAEAMEKEDG VTGAVKAF | |||
| Full Sequence |
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| Protein Sequence Length: 445 Download |
| MLIVGTRGDV QPFVAIGKRL QDYGHRVRLA THSNFKDFVL TAGLEFYPLG GDPKVLAGYM 60 VKNKGFLPSG PSEIPVQRNQ MKEIIYSLLP ACRDPDLDSG IAFKADAIIA NPPAYGHVHV 120 AEALKIPIHI FFTMPWTPTS EFPHPLSRVK QPAGYRLSYQ IVDSLIWLGI RDMINDVRKK 180 KLKLRPVTYL SGSQGFDSDV PHGYIWSPHL VPKPKDWGPK VDVVGFCFLD LASNYEPPES 240 LVKWLEAGSK PIYIGFGSLP VQEPEKMTQI IVEAFEQTGQ RGIINKGWGG LGNLAEPKDS 300 IYLLDNIPHD WLFLQCKAVV HHGGAGTTAA GLRAACPTTI VPFFGDQPFW GERVHARGVG 360 PPPIPVDEFS LPKLINAINF MLDPKVKERA VELAEAMEKE DGVTGAVKAF FKHYSRSKTQ 420 PKPERETSPE PSRFFSISRC FGCS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 2.0e-34 | 5 | 420 | 427 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 1.0e-35 | 1 | 143 | 143 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 4.0e-120 | 1 | 413 | 417 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 1 | 444 | 164 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 1 | 444 | 176 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 1 | 444 | 223 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321244.1 | 0 | 1 | 443 | 110 | 552 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521125.1 | 0 | 1 | 444 | 185 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 3e-34 | 5 | 420 | 9 | 387 | D Chain D, Crystal Structure Of C-Phycocyanin From Phormidium, Lyngbya Spp. (Marine) And Spirulina Sp. (Fresh Water) Shows Two Different Ways Of Energy Transfer Between Two Hexamers |
| PDB | 3h4i_A | 3e-34 | 5 | 420 | 9 | 387 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 3e-24 | 3 | 402 | 7 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 3e-24 | 3 | 402 | 7 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 6e-22 | 241 | 418 | 230 | 402 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CX664063 | 295 | 96 | 390 | 0 |
| GT046352 | 335 | 6 | 340 | 0 |
| FC893365 | 280 | 165 | 444 | 0 |
| DY281458 | 281 | 165 | 445 | 0 |
| GT046352 | 32 | 333 | 364 | 0.0009 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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