Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G286200.1 |
Family | GH9 |
Protein Properties | Length: 482 Molecular Weight: 53642 Isoelectric Point: 7.4309 |
Chromosome | Chromosome/Scaffold: 04 Start: 61677733 End: 61681636 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 27 | 475 | 0 |
NYKEALTKSLMFLEAQRSGKLPADNRIHWRGDSALDDGKEANVDLVGGYYDAGDNVKYGMPMAFTITTLAWSAIAYEKELKAAGEMGNVHSAIRWGTDYF LKCGKKRGIFYVQVGDPVEDHKCWVRPETMKTPRTVLQINETVPGTEIAAETSAAMAASSIVFRYVDPPYARRLLNKAKSLFYFGKKNKGTFDGECPFYC SFSGYNDELLWAASWLYTATQDQKFRKFITEDAVSAVVDEFNWDLKYAGIQVLLSDTFLQSNDEALKIFKDHADSYICSVLPQSPYFKVPKTPGGLIHLR DGANLQYVTGVSFLFSIYGDLLQRHNVKVKCDCQEFDASTILNFAKQQMDYILGANPLGRSYMVGFGNNPPTQAHHRGASIPLSEANVDINCGMSFARWF NKNSPNPNELTGAILGGPDKQDKFSDLRWTSIYTEPCTYVNSLAVAGLA |
Full Sequence |
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Protein Sequence Length: 482 Download |
MGTKTLFAAV LITWLAAFQC CNGHNFNYKE ALTKSLMFLE AQRSGKLPAD NRIHWRGDSA 60 LDDGKEANVD LVGGYYDAGD NVKYGMPMAF TITTLAWSAI AYEKELKAAG EMGNVHSAIR 120 WGTDYFLKCG KKRGIFYVQV GDPVEDHKCW VRPETMKTPR TVLQINETVP GTEIAAETSA 180 AMAASSIVFR YVDPPYARRL LNKAKSLFYF GKKNKGTFDG ECPFYCSFSG YNDELLWAAS 240 WLYTATQDQK FRKFITEDAV SAVVDEFNWD LKYAGIQVLL SDTFLQSNDE ALKIFKDHAD 300 SYICSVLPQS PYFKVPKTPG GLIHLRDGAN LQYVTGVSFL FSIYGDLLQR HNVKVKCDCQ 360 EFDASTILNF AKQQMDYILG ANPLGRSYMV GFGNNPPTQA HHRGASIPLS EANVDINCGM 420 SFARWFNKNS PNPNELTGAI LGGPDKQDKF SDLRWTSIYT EPCTYVNSLA VAGLAKLTCH 480 K* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 4.0e-156 | 1 | 477 | 496 | + endoglucanase | ||
PLN02266 | PLN02266 | 1.0e-156 | 25 | 477 | 463 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 6.0e-168 | 27 | 475 | 462 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 2.0e-179 | 3 | 477 | 479 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 6 | 480 | 475 | + Endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB83158.1 | 0 | 20 | 477 | 27 | 480 | cellulase-like protein [Arabidopsis thaliana] |
EMBL | CAN82881.1 | 0 | 22 | 480 | 9 | 466 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 8 | 471 | 9 | 475 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 10 | 479 | 495 | 968 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189972.2 | 0 | 20 | 477 | 27 | 483 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 26 | 479 | 3 | 430 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1ksc_A | 0 | 26 | 479 | 3 | 430 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1ks8_A | 0 | 26 | 479 | 3 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 26 | 452 | 24 | 434 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 26 | 478 | 4 | 441 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |