Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G170600.2 |
Family | GH9 |
Protein Properties | Length: 540 Molecular Weight: 60700.2 Isoelectric Point: 5.6462 |
Chromosome | Chromosome/Scaffold: 07 Start: 15390029 End: 15393368 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 58 | 522 | 0 |
DYADALTKSLLYFESQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGIIEFHDEIAIAGELEHALEAIKWGTDYF IKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRQAYKIDQSNPGSDLAGETAAAMAAASIVFKKTNTHYSHLLLHHAQELFEFGDKYRGKYDGSVAVVK NYYASVSGYMDELLWAALWLYEATDKEEYLKYVVNNADAFGGIGWAITEFSWDVKYAGVQIMASKLLEKEKHKQHAHILKQYRSKAEYYLCSCLNKNNDT TTNIDRTPGGLLYIRQWNNMQYVTTAAFLLTIYSEFLQDLNQNLRCPAGTVDHEEILSFAKSQVDYVLGSNPMNMSYLVGYGSKYPTKVHHRGASIVSYR ENKGFIGCTQGYDHWYNRAEVNPNVLVGAVVGGPDSEDNFWDQRDNYMQTEACTYNTAPLVGVLA |
Full Sequence |
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Protein Sequence Length: 540 Download |
MVGLGGKEGT MEKKMMVKQQ LNNNHQNTPR FAPHSTLLLF SAAVFAILAT TAAAQPFDYA 60 DALTKSLLYF ESQRSGRLPY NQRVTWRDHS GLTDGLEQGV DLVGGYYDAG DHVKFGLPMA 120 FTVTMLSWGI IEFHDEIAIA GELEHALEAI KWGTDYFIKA HTSPNVLWAE VGDGDTDHYC 180 WQRPEDMTTS RQAYKIDQSN PGSDLAGETA AAMAAASIVF KKTNTHYSHL LLHHAQELFE 240 FGDKYRGKYD GSVAVVKNYY ASVSGYMDEL LWAALWLYEA TDKEEYLKYV VNNADAFGGI 300 GWAITEFSWD VKYAGVQIMA SKLLEKEKHK QHAHILKQYR SKAEYYLCSC LNKNNDTTTN 360 IDRTPGGLLY IRQWNNMQYV TTAAFLLTIY SEFLQDLNQN LRCPAGTVDH EEILSFAKSQ 420 VDYVLGSNPM NMSYLVGYGS KYPTKVHHRG ASIVSYRENK GFIGCTQGYD HWYNRAEVNP 480 NVLVGAVVGG PDSEDNFWDQ RDNYMQTEAC TYNTAPLVGV LAKLLQLEEN HELELLASY* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02420 | PLN02420 | 0 | 24 | 523 | 502 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 58 | 523 | 466 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 55 | 523 | 469 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 58 | 522 | 467 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 0 | 58 | 523 | 466 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28855.1 | 0 | 53 | 532 | 29 | 486 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_180858.1 | 0 | 37 | 523 | 19 | 503 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002321149.1 | 0 | 11 | 539 | 1 | 526 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002525326.1 | 0 | 29 | 539 | 22 | 527 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002529469.1 | 0 | 54 | 530 | 24 | 498 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 57 | 527 | 3 | 431 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ksc_A | 0 | 57 | 527 | 3 | 431 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ks8_A | 0 | 57 | 527 | 3 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 53 | 527 | 20 | 462 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 57 | 526 | 4 | 442 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY287831 | 339 | 57 | 395 | 0 |
DY274365 | 383 | 12 | 394 | 0 |
HO783495 | 379 | 62 | 440 | 0 |
DY276095 | 316 | 104 | 418 | 0 |
FC898934 | 301 | 104 | 403 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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