Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si013602m |
Family | GH9 |
Protein Properties | Length: 503 Molecular Weight: 54000.8 Isoelectric Point: 8.3154 |
Chromosome | Chromosome/Scaffold: 6 Start: 7852013 End: 7853861 |
Description | cellulase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 34 | 494 | 0 |
NYADALAKSIIFFEGQRSGKLPPGNRMTWRGDSGLRDGAQHNVDLTGGYYDAGDNIKFGLPMAFTTTMLAWSVADFGKFMGAELPHARAAVRWGADYLLK AATSTPDTLYVQVGDPNQDHRCWERPEDMDTPRSVYAVTKDTPGSDVAAETAAALAASAVAFRRADPAYSSRLLHAAMRAFELADRHRGSYSDGSLGGAV CPFYCSYSGYQDELLWAAAWLHRASNNASFMSYVRANGLQLGAGDDDFSFSWDDKRAGTKVLLAKGFLRRNHNLPGLELYKAHSDSYICSLVPGTASFQP SQYTPGGLLYKEGGSNMQYATAATFLLVAYARYLRSAGAGVVCGGREVAPAELVALARRQVDYVLGKNPAGTSYMVGFGPRYPRRLHHRGASMPAVREHP GRIGCDEGFRYLHSGEPDANLLVGAVVGGPDARDGFVDDRDGYGQTEPATYINAPLVGALA |
Full Sequence |
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Protein Sequence Length: 503 Download |
MALPKSTNRR SRVLAAAAAL HLLLLAPAPA AAFNYADALA KSIIFFEGQR SGKLPPGNRM 60 TWRGDSGLRD GAQHNVDLTG GYYDAGDNIK FGLPMAFTTT MLAWSVADFG KFMGAELPHA 120 RAAVRWGADY LLKAATSTPD TLYVQVGDPN QDHRCWERPE DMDTPRSVYA VTKDTPGSDV 180 AAETAAALAA SAVAFRRADP AYSSRLLHAA MRAFELADRH RGSYSDGSLG GAVCPFYCSY 240 SGYQDELLWA AAWLHRASNN ASFMSYVRAN GLQLGAGDDD FSFSWDDKRA GTKVLLAKGF 300 LRRNHNLPGL ELYKAHSDSY ICSLVPGTAS FQPSQYTPGG LLYKEGGSNM QYATAATFLL 360 VAYARYLRSA GAGVVCGGRE VAPAELVALA RRQVDYVLGK NPAGTSYMVG FGPRYPRRLH 420 HRGASMPAVR EHPGRIGCDE GFRYLHSGEP DANLLVGAVV GGPDARDGFV DDRDGYGQTE 480 PATYINAPLV GALAYFAGTA KY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 4.0e-175 | 41 | 494 | 458 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 41 | 497 | 457 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 41 | 497 | 457 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 41 | 497 | 459 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 0 | 41 | 494 | 459 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ05384.1 | 0 | 27 | 501 | 28 | 504 | hypothetical protein OsI_27591 [Oryza sativa Indica Group] |
GenBank | EAZ41304.1 | 0 | 27 | 501 | 28 | 504 | hypothetical protein OsJ_25815 [Oryza sativa Japonica Group] |
RefSeq | NP_001060848.1 | 0 | 27 | 501 | 47 | 523 | Os08g0114200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002299423.1 | 0 | 34 | 497 | 32 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002443762.1 | 0 | 37 | 501 | 34 | 501 | hypothetical protein SORBIDRAFT_07g001480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 32 | 494 | 2 | 426 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
PDB | 1ksc_A | 0 | 32 | 494 | 2 | 426 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
PDB | 1ks8_A | 0 | 32 | 494 | 2 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 32 | 494 | 3 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 32 | 494 | 3 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |