| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G011500.3 |
| Family | GT35 |
| Protein Properties | Length: 984 Molecular Weight: 111114 Isoelectric Point: 6.8396 |
| Chromosome | Chromosome/Scaffold: 06 Start: 2483500 End: 2492984 |
| Description | Glycosyl transferase, family 35 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT35 | 177 | 501 | 0 |
| ALSKLGHNLENIASQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYRYGLFKQRITKDGQEEVAENWLEMSNPWEIVRNDVAYPIKFYGKVLTDS DGKKHWIGGEDIQAVAYDVPIPGYETKTTINLRLWSTKAPSGDFDLSVFNSGKHTQAAEALYNAEKICYVLYPGDESLEGKILRLKQQYTLCSASLQDII ARFERRSGAKVKWDEFPDKVAVQMNDTHPTLCIPELMRILIDVKGLSWNEAWNITQRTVAYTNHTVLPEALEKWSLELMEKLLPRHMEIIEMVDEELIRT IVSEHGKADSNLLEKKLKQMRILEN | |||
| GT35 | 580 | 978 | 0 |
| PKLVRMANLCVVGGHAVNGVAAIHSEIVKDEVFNDFFQLWPEKFQNKTNGVTPRRWIRFCNPELSKIITRWTGSEDWVLNTEKLSELRKFADNEDLQIQW RAAKRSNKLKVASLIKERTGYIVSPDSMFDIQVKRIHEYKRQLLNILGIVYRYKKMKEMSASERKKKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATV NHDPDIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGEENFFLFGAKAHEIAGLRKERAEGKF VPDPRFEEVKKFIKSGVFGSSNYNELLGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDETYKDQKVWTRMSIMNTGGSYNFSSDRTIHEYAREIWNIK | |||
| Full Sequence |
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| Protein Sequence Length: 984 Download |
| MATWRYSTMP GGAEAVSSRN AVGRFVDFSH GGGGGRRVIK SDQLMLIRKW QLRPVKRSFS 60 VRNVSSEQQQ KVKDLVTQQQ GSYNPFPPDA SSIASSIKYH SEFTPLFSPE KFDPPKAFFA 120 TAQSIRDALI INWNATYDYY ERLNVKQAYY LSMEFLQGRA LLNAIGNLGL TGAYAEALSK 180 LGHNLENIAS QEPDAALGNG GLGRLASCFL DSLATLNYPA WGYGLRYRYG LFKQRITKDG 240 QEEVAENWLE MSNPWEIVRN DVAYPIKFYG KVLTDSDGKK HWIGGEDIQA VAYDVPIPGY 300 ETKTTINLRL WSTKAPSGDF DLSVFNSGKH TQAAEALYNA EKICYVLYPG DESLEGKILR 360 LKQQYTLCSA SLQDIIARFE RRSGAKVKWD EFPDKVAVQM NDTHPTLCIP ELMRILIDVK 420 GLSWNEAWNI TQRTVAYTNH TVLPEALEKW SLELMEKLLP RHMEIIEMVD EELIRTIVSE 480 HGKADSNLLE KKLKQMRILE NVELPAAFSD LLVKPKKSPV AVPSDELGES EEEEEAEAEA 540 EAEEEKEEEK LKPAGGKIKS VKEGTQGKKK KIPEPVPEPP KLVRMANLCV VGGHAVNGVA 600 AIHSEIVKDE VFNDFFQLWP EKFQNKTNGV TPRRWIRFCN PELSKIITRW TGSEDWVLNT 660 EKLSELRKFA DNEDLQIQWR AAKRSNKLKV ASLIKERTGY IVSPDSMFDI QVKRIHEYKR 720 QLLNILGIVY RYKKMKEMSA SERKKKFVPR VCIFGGKAFA TYVQAKRIVK FITDVGATVN 780 HDPDIGDLLK VIFVPDYNVS VAELLIPASE LSQHISTAGM EASGTSNMKF AMNGCILIGT 840 LDGANVEIRE EVGEENFFLF GAKAHEIAGL RKERAEGKFV PDPRFEEVKK FIKSGVFGSS 900 NYNELLGSLE GNEGFGRADY FLVGKDFPSY IECQEKVDET YKDQKVWTRM SIMNTGGSYN 960 FSSDRTIHEY AREIWNIKPV ELP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00343 | Phosphorylase | 6.0e-140 | 177 | 500 | 324 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 583 | 977 | 400 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 94 | 501 | 412 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| pfam00343 | Phosphorylase | 0 | 583 | 979 | 402 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| TIGR02093 | P_ylase | 0 | 583 | 977 | 400 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ11757.1 | 0 | 59 | 983 | 4 | 935 | alpha-1,4 glucan phosphorylase [Gossypium hirsutum] |
| RefSeq | NP_189578.1 | 0 | 1 | 983 | 1 | 962 | glucan phosphorylase, putative [Arabidopsis thaliana] |
| Swiss-Prot | P53536 | 0 | 51 | 982 | 44 | 1002 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
| RefSeq | XP_002305367.1 | 0 | 53 | 983 | 5 | 949 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526085.1 | 0 | 20 | 983 | 18 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1z8d_A | 0 | 581 | 979 | 438 | 830 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 1z8d_A | 0 | 89 | 500 | 24 | 433 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_B | 0 | 581 | 978 | 402 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_B | 0 | 144 | 491 | 57 | 395 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_A | 0 | 581 | 978 | 402 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778303 | 868 | 117 | 984 | 0 |
| HO797178 | 401 | 584 | 984 | 0 |
| HO620767 | 403 | 582 | 984 | 0 |
| HO613954 | 403 | 582 | 984 | 0 |
| HO778303 | 125 | 3 | 119 | 0.0000000000006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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