| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G011500.7 |
| Family | GT35 |
| Protein Properties | Length: 734 Molecular Weight: 83206.3 Isoelectric Point: 6.1285 |
| Chromosome | Chromosome/Scaffold: 06 Start: 2483587 End: 2490331 |
| Description | Glycosyl transferase, family 35 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT35 | 2 | 251 | 0 |
| SNPWEIVRNDVAYPIKFYGKVLTDSDGKKHWIGGEDIQAVAYDVPIPGYETKTTINLRLWSTKAPSGDFDLSVFNSGKHTQAAEALYNAEKICYVLYPGD ESLEGKILRLKQQYTLCSASLQDIIARFERRSGAKVKWDEFPDKVAVQMNDTHPTLCIPELMRILIDVKGLSWNEAWNITQRTVAYTNHTVLPEALEKWS LELMEKLLPRHMEIIEMVDEELIRTIVSEHGKADSNLLEKKLKQMRILEN | |||
| GT35 | 330 | 728 | 0 |
| PKLVRMANLCVVGGHAVNGVAAIHSEIVKDEVFNDFFQLWPEKFQNKTNGVTPRRWIRFCNPELSKIITRWTGSEDWVLNTEKLSELRKFADNEDLQIQW RAAKRSNKLKVASLIKERTGYIVSPDSMFDIQVKRIHEYKRQLLNILGIVYRYKKMKEMSASERKKKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATV NHDPDIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGEENFFLFGAKAHEIAGLRKERAEGKF VPDPRFEEVKKFIKSGVFGSSNYNELLGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDETYKDQKVWTRMSIMNTGGSYNFSSDRTIHEYAREIWNIK | |||
| Full Sequence |
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| Protein Sequence Length: 734 Download |
| MSNPWEIVRN DVAYPIKFYG KVLTDSDGKK HWIGGEDIQA VAYDVPIPGY ETKTTINLRL 60 WSTKAPSGDF DLSVFNSGKH TQAAEALYNA EKICYVLYPG DESLEGKILR LKQQYTLCSA 120 SLQDIIARFE RRSGAKVKWD EFPDKVAVQM NDTHPTLCIP ELMRILIDVK GLSWNEAWNI 180 TQRTVAYTNH TVLPEALEKW SLELMEKLLP RHMEIIEMVD EELIRTIVSE HGKADSNLLE 240 KKLKQMRILE NVELPAAFSD LLVKPKKSPV AVPSDELGES EEEEEAEAEA EAEEEKEEEK 300 LKPAGGKIKS VKEGTQGKKK KIPEPVPEPP KLVRMANLCV VGGHAVNGVA AIHSEIVKDE 360 VFNDFFQLWP EKFQNKTNGV TPRRWIRFCN PELSKIITRW TGSEDWVLNT EKLSELRKFA 420 DNEDLQIQWR AAKRSNKLKV ASLIKERTGY IVSPDSMFDI QVKRIHEYKR QLLNILGIVY 480 RYKKMKEMSA SERKKKFVPR VCIFGGKAFA TYVQAKRIVK FITDVGATVN HDPDIGDLLK 540 VIFVPDYNVS VAELLIPASE LSQHISTAGM EASGTSNMKF AMNGCILIGT LDGANVEIRE 600 EVGEENFFLF GAKAHEIAGL RKERAEGKFV PDPRFEEVKK FIKSGVFGSS NYNELLGSLE 660 GNEGFGRADY FLVGKDFPSY IECQEKVDET YKDQKVWTRM SIMNTGGSYN FSSDRTIHEY 720 AREIWNIKPV ELP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00343 | Phosphorylase | 1.0e-106 | 3 | 250 | 248 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 2.0e-117 | 3 | 251 | 252 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 333 | 727 | 400 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| pfam00343 | Phosphorylase | 0 | 333 | 729 | 402 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| TIGR02093 | P_ylase | 0 | 333 | 727 | 400 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ11757.1 | 0 | 1 | 733 | 199 | 935 | alpha-1,4 glucan phosphorylase [Gossypium hirsutum] |
| EMBL | CBI22291.1 | 0 | 1 | 733 | 251 | 982 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | P53536 | 0 | 1 | 732 | 255 | 1002 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
| RefSeq | XP_002305367.1 | 0 | 1 | 733 | 210 | 949 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526085.1 | 0 | 1 | 733 | 247 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1z8d_A | 0 | 331 | 729 | 438 | 830 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 1z8d_A | 0 | 3 | 250 | 188 | 433 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_B | 0 | 331 | 728 | 402 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_B | 0 | 4 | 241 | 167 | 395 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_A | 0 | 331 | 728 | 402 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778303 | 734 | 1 | 734 | 0 |
| HO797178 | 401 | 334 | 734 | 0 |
| HO620767 | 403 | 332 | 734 | 0 |
| HO613954 | 403 | 332 | 734 | 0 |
| HO632633 | 409 | 332 | 734 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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