| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g40330.1 |
| Family | GH17 |
| Protein Properties | Length: 216 Molecular Weight: 22849.9 Isoelectric Point: 7.7469 |
| Chromosome | Chromosome/Scaffold: 3 Start: 22424025 End: 22424841 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 134 | 211 | 7.3e-29 |
| IYSAMEKEGGSDVPVVISETGWPSADGRGASKDNARVYNQNLINHVGKGTPKRPVALETYIFAMFDENQKKGDAIERN | |||
| GH17 | 1 | 133 | 1.4e-36 |
| MRIYLPNDTILHALRGTRIAVVLDAPDVRSLASNDATNASSSAAQAWVQANVRPYYPDVNIKYIAVGNEVKDGADKPKILPAMNNIRDALSAAGLGGHIK VSTAVEMSLVAGSPLPSGSAFADPPSIMGPIVN | |||
| Full Sequence |
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| Protein Sequence Length: 216 Download |
| MRIYLPNDTI LHALRGTRIA VVLDAPDVRS LASNDATNAS SSAAQAWVQA NVRPYYPDVN 60 IKYIAVGNEV KDGADKPKIL PAMNNIRDAL SAAGLGGHIK VSTAVEMSLV AGSPLPSGSA 120 FADPPSIMGP IVNIYSAMEK EGGSDVPVVI SETGWPSADG RGASKDNARV YNQNLINHVG 180 KGTPKRPVAL ETYIFAMFDE NQKKGDAIER NKFTS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-7 | 53 | 203 | 175 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-66 | 1 | 211 | 269 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP12921.1 | 0 | 1 | 215 | 1 | 218 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
| GenBank | ABF97482.1 | 0 | 1 | 215 | 1 | 215 | Glycosyl hydrolases family 17 protein [Oryza sativa (japonica cultivar-group)] |
| DDBJ | BAH92255.1 | 0 | 1 | 169 | 1 | 225 | Os03g0600500 [Oryza sativa Japonica Group] |
| GenBank | EAY90914.1 | 0 | 1 | 211 | 60 | 307 | hypothetical protein OsI_12531 [Oryza sativa Indica Group] |
| RefSeq | NP_001050619.1 | 0 | 1 | 215 | 1 | 271 | Os03g0600600 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 1 | 210 | 30 | 289 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 1 | 210 | 30 | 289 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 0 | 1 | 211 | 32 | 298 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 0 | 1 | 211 | 32 | 298 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur7_B | 0 | 1 | 211 | 32 | 298 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CN124833 | 184 | 53 | 211 | 0 |
| CJ964835 | 213 | 56 | 211 | 5.60519e-45 |
| CJ957912 | 213 | 56 | 211 | 9.80909e-45 |
| CJ960024 | 265 | 4 | 211 | 9.80909e-45 |
| CJ962565 | 209 | 60 | 211 | 2.99878e-43 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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