| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_170547g0010 |
| Family | PL1 |
| Protein Properties | Length: 432 Molecular Weight: 48317.4 Isoelectric Point: 9.0055 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| PL1 | 148 | 295 | 4.6e-39 |
| AVIQTEPLWIIFQRDMVIQLKEELIMNSYKTIDGRGANVHIANGACITVQYVTHIIIHGIHIHDCKPAGNAMVRDSPGHYGWRTKSDGDGVSIFGGSNIW VDHCSLLNCADGLIDAIHGSTAITISNNFMTHHDKVMLLGHSDEASAT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 432 Download |
| MSGYRCILAL LVFHGIFCAR SSAGKSFEIF EKLTAVVLIQ PAVVSGSKNA QQSATKYVEE 60 PERVVRIIER SINSSRRELS YLSCGTGNPI DDCWRCNPDW ENNRRRLADC AIGFRRNAIG 120 GKNGRLYVVP DPNDYDAVNP RPGTLRHAVI QTEPLWIIFQ RDMVIQLKEE LIMNSYKTID 180 GRGANVHIAN GACITVQYVT HIIIHGIHIH DCKPAGNAMV RDSPGHYGWR TKSDGDGVSI 240 FGGSNIWVDH CSLLNCADGL IDAIHGSTAI TISNNFMTHH DKVMLLGHSD EASATNAQMP 300 TRLLPRGEQR LHPLGNPRQS IPRTCQSLLQ GGDEARGRTG KRMEAVELEV RRRPDVERGV 360 LYSIGRRCIV KLCEGFESLR KAIVSCRLPH RERRHSELPK RFPLLTPTTT VRRSHPESPC 420 LSQLAFLLSF FV |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 1.0e-12 | 175 | 290 | 125 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 9.0e-35 | 168 | 296 | 152 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 6.0e-39 | 162 | 291 | 141 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF19195.1 | 0 | 58 | 301 | 29 | 272 | AF206319_1 pectate lyase 1 [Musa acuminata AAA Group] |
| GenBank | ABK25017.1 | 0 | 1 | 291 | 1 | 291 | unknown [Picea sitchensis] |
| GenBank | ABR17791.1 | 0 | 50 | 405 | 25 | 412 | unknown [Picea sitchensis] |
| GenBank | ABR18471.1 | 0 | 4 | 291 | 9 | 296 | unknown [Picea sitchensis] |
| GenBank | ABV32549.1 | 0 | 59 | 290 | 34 | 267 | pectase lyase [Prunus persica] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 88 | 311 | 2 | 230 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 88 | 311 | 2 | 230 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3zsc_A | 0.00000003 | 157 | 303 | 50 | 184 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 2o1d_A | 0.000005 | 236 | 303 | 184 | 268 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 2o17_A | 0.000005 | 236 | 303 | 184 | 268 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| Signal Peptide | ||||
|---|---|---|---|---|
 | ||||
| Cleavage Site | ||||
| 0 | ||||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CT576633 | 246 | 79 | 323 | 0 |
| GT244662 | 246 | 79 | 323 | 0 |
| ES868163 | 215 | 79 | 293 | 0 |
| EX335774 | 213 | 79 | 291 | 0 |
| CT576633 | 27 | 292 | 318 | 0.57 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |