| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g086530.1 |
| Family | GH17 |
| Protein Properties | Length: 389 Molecular Weight: 43160.8 Isoelectric Point: 5.9423 |
| Chromosome | Chromosome/Scaffold: 2 Start: 26591664 End: 26594352 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 30 | 343 | 0 |
| GINYGQIANNLPSHSRVAVLIKSLNVSRIKLYDADPNVLTTFSNSNXXXXXXLNDLQSMKDPIKAQSWVQQNVQPYLPQTKITSINVGNEVLGNNDINSY NNLLPAMKSVYNALVNLGLSQQVTVTTSHSFIIMSNSFPPSSGAFREDLIQYIQPLLSFQAQIKSPFLINAYPFFAYKGDPQHVSLNYVLFQPNAGSIDP ATNLHYDNMLYAQIDAVYAAIKAVGHSDIEVKISETGWPSKGDPDEVGASLQNAEIYHSNLLKRIAMKQGTPAKPSIPIDIYVFALFNEDLKTGPASERN YGLYYPDGTPVYNL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 389 Download |
| MAISSFCFRV IMLFLTFSDL FMQSYGLDFG INYGQIANNL PSHSRVAVLI KSLNVSRIKL 60 YDADPNVLTT FSNSNXXXXX XLNDLQSMKD PIKAQSWVQQ NVQPYLPQTK ITSINVGNEV 120 LGNNDINSYN NLLPAMKSVY NALVNLGLSQ QVTVTTSHSF IIMSNSFPPS SGAFREDLIQ 180 YIQPLLSFQA QIKSPFLINA YPFFAYKGDP QHVSLNYVLF QPNAGSIDPA TNLHYDNMLY 240 AQIDAVYAAI KAVGHSDIEV KISETGWPSK GDPDEVGASL QNAEIYHSNL LKRIAMKQGT 300 PAKPSIPIDI YVFALFNEDL KTGPASERNY GLYYPDGTPV YNLGLKNQVP QGGYFPGMII 360 EGKSNALSIN FVLYILTFLV FVWELSIL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-7 | 103 | 336 | 241 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 9.0e-95 | 30 | 343 | 317 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94377.1 | 0 | 26 | 380 | 24 | 377 | unknown [Populus trichocarpa] |
| GenBank | ACU21124.1 | 0 | 21 | 386 | 29 | 390 | unknown [Glycine max] |
| EMBL | CAN80621.1 | 0 | 25 | 382 | 95 | 455 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312820.1 | 0 | 26 | 365 | 24 | 359 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002328249.1 | 0 | 26 | 373 | 26 | 369 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 28 | 343 | 1 | 313 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3f55_C | 0 | 28 | 343 | 1 | 313 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3f55_B | 0 | 28 | 343 | 1 | 313 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3f55_A | 0 | 28 | 343 | 1 | 313 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3em5_D | 0 | 28 | 343 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
