Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00032277m |
Family | GH17 |
Protein Properties | Length: 321 Molecular Weight: 33311.9 Isoelectric Point: 4.7564 |
Chromosome | Chromosome/Scaffold: 0125687 Start: 17 End: 2135 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 320 | 0 |
IGINYGDVADNLPPPSSTARLIQSTTISKVRLYGTDPAVVSAFAGTGISLLLGAANGDIANLASSLAAAAAWVAAHIPASSPAVSTVSVGNEVLFADASL ASQLVPAMQNLYSALPPNSSIKVSTVHAMDVLASSDPPSSGAFKPELDAALNPVLAFLSKTGSPFLINPYPYFAYLSDPRPETLAFCLFQPNAGRPDAGS GLTYTNMFDAMVDAVRAALDAKGYKDVEIVVAETGWPHKGDPDEAGATAENARAFVSGLVSHLRSLAGTPRVPGKSVETYIFAVYDEDLKPG |
Full Sequence |
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Protein Sequence Length: 321 Download |
MAERGWVVLA LLGVVQLLRL PLAAPQSFIG INYGDVADNL PPPSSTARLI QSTTISKVRL 60 YGTDPAVVSA FAGTGISLLL GAANGDIANL ASSLAAAAAW VAAHIPASSP AVSTVSVGNE 120 VLFADASLAS QLVPAMQNLY SALPPNSSIK VSTVHAMDVL ASSDPPSSGA FKPELDAALN 180 PVLAFLSKTG SPFLINPYPY FAYLSDPRPE TLAFCLFQPN AGRPDAGSGL TYTNMFDAMV 240 DAVRAALDAK GYKDVEIVVA ETGWPHKGDP DEAGATAENA RAFVSGLVSH LRSLAGTPRV 300 PGKSVETYIF AVYDEDLKPG K |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-5 | 118 | 319 | 205 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-75 | 29 | 321 | 298 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE59830.1 | 0 | 13 | 321 | 15 | 308 | hypothetical protein OsJ_12394 [Oryza sativa Japonica Group] |
RefSeq | NP_001051111.1 | 0 | 13 | 321 | 15 | 324 | Os03g0722500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147326.1 | 0 | 10 | 320 | 11 | 321 | LOC100280934 [Zea mays] |
RefSeq | NP_001150853.1 | 0 | 19 | 321 | 21 | 323 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002466550.1 | 0 | 20 | 321 | 23 | 324 | hypothetical protein SORBIDRAFT_01g009770 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 320 | 1 | 291 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 29 | 320 | 1 | 284 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 29 | 320 | 1 | 284 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 29 | 321 | 3 | 293 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 29 | 321 | 3 | 293 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |