CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00018963m
FamilyGH16
Protein PropertiesLength: 286 Molecular Weight: 31865.6 Isoelectric Point: 6.3948
ChromosomeChromosome/Scaffold: 051752 Start: 4287 End: 5581
Descriptionxyloglucan endotransglucosylase/hydrolase 25
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16352081e-25
  TDGHVRADYNAQGQQVTSLILDRQSGGAFYSRQKYLYGVFSIQMKLIHGNSAGTVTSFYLTSGDGPGHDEIDMEFMGNSTGEPVVLNTNVWAAGDGKKEQ
  QFYLWFDPAADFHTYTIIWNDKNVIFKVDDLFIRSFRRHADLPYPGGKPMSVHATLWDGSFWATRQGEVKVDWA
Full Sequence
Protein Sequence     Length: 286     Download
MAAALRRALS AAVAVALLAA PSASADSWLY EKFTTDGHVR ADYNAQGQQV TSLILDRQSG    60
GAFYSRQKYL YGVFSIQMKL IHGNSAGTVT SFYLTSGDGP GHDEIDMEFM GNSTGEPVVL    120
NTNVWAAGDG KKEQQFYLWF DPAADFHTYT IIWNDKNVIF KVDDLFIRSF RRHADLPYPG    180
GKPMSVHATL WDGSFWATRQ GEVKVDWAAA PFVVSYRGYS ADACTPDGEG RPLRCPTGTD    240
RWMSRQLDAA EWGTVAWARK NYMHYNYCED GWRFPQGFPA ECSRN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02175GH16_lichenase3.0e-1759164108+
pfam06955XET_C1.0e-1723528251+
pfam00722Glyco_hydro_163.0e-5947208163+
PLN03161PLN031614.0e-7153284239+
cd02176GH16_XET5.0e-11730282258+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG39534.101028514290xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACS13757.102628423282xyloglucan xyloglucosyl transferase [Hordeum vulgare]
RefSeqNP_001151500.102628527286LOC100285134 [Zea mays]
RefSeqXP_002446425.102428520277hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
RefSeqXP_002447796.102628525287hypothetical protein SORBIDRAFT_06g015940 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04728535275A Chain A, Arabidopsis Thaliana Peroxidase N
PDB1un1_A04728535275A Chain A, Arabidopsis Thaliana Peroxidase N
PDB1umz_B04728535275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04728535275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B03827332259A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Signal Peptide
Cleavage Site
25
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CO456605254262790
EE174431254262790
EC902220242262670
DR963014242262670
FE633116224622850
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00011651mPavirv00065073mPavirv00039266mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny