CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb06g015940.1
FamilyGH16
Protein PropertiesLength: 288 Molecular Weight: 31941.6 Isoelectric Point: 5.6513
ChromosomeChromosome/Scaffold: 6 Start: 44131262 End: 44132501
Descriptionxyloglucan endotransglucosylase/hydrolase 25
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16342062.1e-26
  TDGNVRADYNAEGQQVTSLILNQQSGGAFRSRQRYLYGEFSIQMKLIPGNSAGTVTSFYLTSGDGDGHDEIDMEFMGNSSGDPVVLNTNVWANGDGKKEH
  QFYLWFDPAADFHTYTIIWNDKNVIFKVDDLFIRSFKRYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDW
Full Sequence
Protein Sequence     Length: 288     Download
MARRAVSVAV VALALLAAAT AASADSWLYE KFTTDGNVRA DYNAEGQQVT SLILNQQSGG    60
AFRSRQRYLY GEFSIQMKLI PGNSAGTVTS FYLTSGDGDG HDEIDMEFMG NSSGDPVVLN    120
TNVWANGDGK KEHQFYLWFD PAADFHTYTI IWNDKNVIFK VDDLFIRSFK RYRDLPYPGG    180
KPMSVHATLW DGSYWATQQG KVKVDWSNSP FVVSYRGYTA DACVPTGGGD VGAPLSCPAG    240
TDRWMNRQLD AAEWGTVAWA KKNYMHYNYC DDGWRFPQGF PAECSRN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam06955XET_C6.0e-1723728451+
cd02175GH16_lichenase2.0e-2058163108+
pfam00722Glyco_hydro_162.0e-6046207163+
PLN03161PLN031615.0e-7052286240+
cd02176GH16_XET2.0e-12029284258+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG39534.1012878290xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACS13757.102528623282xyloglucan xyloglucosyl transferase [Hordeum vulgare]
RefSeqNP_001151500.1012876286LOC100285134 [Zea mays]
RefSeqXP_002446425.102328720277hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
RefSeqXP_002447796.1012871287hypothetical protein SORBIDRAFT_06g015940 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04628735275A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB1un1_A04628735275A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB1umz_B04628735275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04628735275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B04727537259A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
24
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CO456605257252810
EE174431257252810
CA151818245252690
EC902220245252690
DR963014245252690
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00011651mPavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny