CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00032512m
FamilyGH16
Protein PropertiesLength: 295 Molecular Weight: 32608.3 Isoelectric Point: 4.6117
ChromosomeChromosome/Scaffold: 0128826 Start: 703 End: 1769
Descriptionxyloglucan endotransglucosylase/hydrolase 25
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16612171.4e-25
  SLVLDKSSGGGFNSTEKYLFGEFSVEMKLVPGNSAGTVTSFYLTSGEGDEHDEIDMEFMGNSSGAPTVLNTNVWASGDGKKEHQFYLWFDPSADFHKYTI
  IWNAKNIIFRVDDVAVRAFRRYDDLPYPDARPMAVHATLWDGSYWATEKGEVPIDWA
Full Sequence
Protein Sequence     Length: 295     Download
MARRSLAPLA PPPALAVTAV VLALALCFNH PASAQSAWLD EFRTDGEVRS DFDASGKQVA    60
SLVLDKSSGG GFNSTEKYLF GEFSVEMKLV PGNSAGTVTS FYLTSGEGDE HDEIDMEFMG    120
NSSGAPTVLN TNVWASGDGK KEHQFYLWFD PSADFHKYTI IWNAKNIIFR VDDVAVRAFR    180
RYDDLPYPDA RPMAVHATLW DGSYWATEKG EVPIDWAAAP FVVSYRGYTA NACVTRGGGG    240
RTSCPAGRNE WMDRELDDTD RLTVAWARRN CLQYNYCEDG WRFPEGFPGE CSRE*         300
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam06955XET_C3.0e-1424429151+
cd02175GH16_lichenase8.0e-1868167102+
pfam00722Glyco_hydro_162.0e-5556217163+
PLN03161PLN031611.0e-6362293239+
cd02176GH16_XET6.0e-10555291242+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACF85167.1092942287unknown [Zea mays]
GenBankACG39534.1092932289xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACS13757.103729324282xyloglucan xyloglucosyl transferase [Hordeum vulgare]
RefSeqNP_001130144.1092942287hypothetical protein LOC100191238 [Zea mays]
RefSeqXP_002445324.10122939290hypothetical protein SORBIDRAFT_07g009410 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B05529434275A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis
PDB1un1_A05529434275A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis
PDB1umz_B05529434275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A05529434275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B06128241259A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Signal Peptide
Cleavage Site
34
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CD437945260382950
DR799053263272870
FL943068212272380
FL899078212272380
DR798740253272770
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00011651m
Pavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny