| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00060261m |
| Family | AA1 |
| Protein Properties | Length: 587 Molecular Weight: 64311.3 Isoelectric Point: 6.5872 |
| Chromosome | Chromosome/Scaffold: 014872 Start: 839 End: 3006 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 101 | 368 | 5e-26 |
| TATFPGPTIEALQGVPLQVTWENHLPDRHILPWDPTVPTAIPRAGGVPTVVHLHGGVHPPRSDGHANAWFTAGFRERGPTWSTPTYAYPNAQSPGVLWYH DHALGLTRANLLAGLLGAYVIRNPAAEAPLGLPCGDAFDRVLVLADRSFLADGSIYMNCTGVDPRAHPQWQPEYFGEAVAVNGKAWPLLAVARRRYRFRI INASNARYFNLSLSNGLPFHVVGSDASYLPRPASVTHLLVAVAEAFDVVVDFSESATPEAELVNTAPY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 587 Download |
| MVPVRAEAVA AALLLLVAAA GVAAGFRTGP PVSKDTLEKV AASLEMYVDE LPQMPKVLGY 60 SLKYGRPEPT HLTIGMYEKK WKFHRDLPAT TVFAFGTSAA TATFPGPTIE ALQGVPLQVT 120 WENHLPDRHI LPWDPTVPTA IPRAGGVPTV VHLHGGVHPP RSDGHANAWF TAGFRERGPT 180 WSTPTYAYPN AQSPGVLWYH DHALGLTRAN LLAGLLGAYV IRNPAAEAPL GLPCGDAFDR 240 VLVLADRSFL ADGSIYMNCT GVDPRAHPQW QPEYFGEAVA VNGKAWPLLA VARRRYRFRI 300 INASNARYFN LSLSNGLPFH VVGSDASYLP RPASVTHLLV AVAEAFDVVV DFSESATPEA 360 ELVNTAPYPY PDGDAPSRLT GKVMKFAVEP AAVLDDRSRV PARLPEYVEV AEEEAAAQRR 420 YIVLYEYEDA ATGSPTHLYI NGKRLEDPAT ETPRAGTTEV WEVINLTQDN HPLHLHLATL 480 QAVRARGLVG LEEFRRCMER LNDATRCDVG RHAVGEEAAV PEHERTWKNV VKIAPGFMTT 540 VVVKFLMVET GRTYPFDATA EPGYVYHCHI LDHEDNAMIR PLKLIK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10965 | PRK10965 | 1.0e-5 | 440 | 578 | 143 | + multicopper oxidase; Provisional | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-10 | 105 | 225 | 124 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PRK10883 | PRK10883 | 5.0e-12 | 189 | 338 | 154 | + FtsI repressor; Provisional | ||
| PRK10965 | PRK10965 | 1.0e-17 | 105 | 338 | 242 | + multicopper oxidase; Provisional | ||
| COG2132 | SufI | 1.0e-37 | 105 | 582 | 479 | + Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ10376.1 | 0 | 30 | 570 | 28 | 566 | hypothetical protein OsJ_00212 [Oryza sativa Japonica Group] |
| GenBank | EAZ22879.1 | 0 | 67 | 586 | 65 | 582 | hypothetical protein OsJ_06565 [Oryza sativa Japonica Group] |
| RefSeq | NP_001041895.1 | 0 | 30 | 586 | 28 | 582 | Os01g0126100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002455264.1 | 0 | 31 | 585 | 33 | 587 | hypothetical protein SORBIDRAFT_03g007440 [Sorghum bicolor] |
| RefSeq | XP_002457447.1 | 0 | 25 | 586 | 23 | 589 | hypothetical protein SORBIDRAFT_03g007480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3zdw_A | 0 | 43 | 584 | 2 | 508 | A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose |
| PDB | 2x88_A | 0 | 43 | 584 | 2 | 508 | A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose |
| PDB | 2x87_A | 0 | 43 | 584 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 2bhf_A | 0 | 43 | 584 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 1w8e_A | 0 | 43 | 584 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
