| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g007440.1 |
| Family | AA1 |
| Protein Properties | Length: 589 Molecular Weight: 64318.5 Isoelectric Point: 6.4419 |
| Chromosome | Chromosome/Scaffold: 3 Start: 7777903 End: 7780289 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 105 | 372 | 7.9e-27 |
| TFPGPTIVARHDVPLSVTWENHLPDRHILPWDPTVPTAIPKNGGVPTVVHLHGSAHPPQADGSAFAWFTAGFRDTGAAWTQATYRYPNVQPPGNLWYHDH ALGLTRANLLAGLLGAYVIEKPEVDVPMDLPCDDDDLHLVVADRSFNVDGSLYMNSTGVAPSVHPQWQPEYFGEAVTVNGKAWPFLAVHRRRYRFRILNA SNARYFNVSLSNGMPFHVVGSDASYLAAPVTVRSLLISPAEIFDVVVDFSASPTAEVEMLNSAPYPFP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 589 Download |
| MVEMPHRVAA ALVVLLVAVA GVVAVSAQVP PAPVTAALLQ QVAGSLQMYV DPLPQMAKIR 60 GYGFQQGRVV PVNLTIGMFH KKWKFHRDLP ETPVFVYGQC ADSATFPGPT IVARHDVPLS 120 VTWENHLPDR HILPWDPTVP TAIPKNGGVP TVVHLHGSAH PPQADGSAFA WFTAGFRDTG 180 AAWTQATYRY PNVQPPGNLW YHDHALGLTR ANLLAGLLGA YVIEKPEVDV PMDLPCDDDD 240 LHLVVADRSF NVDGSLYMNS TGVAPSVHPQ WQPEYFGEAV TVNGKAWPFL AVHRRRYRFR 300 ILNASNARYF NVSLSNGMPF HVVGSDASYL AAPVTVRSLL ISPAEIFDVV VDFSASPTAE 360 VEMLNSAPYP FPTGTAPGPL TGKVMKFVVT PNGPRDPPDN STVPDREVPY ANVASPGPAS 420 ETRHIVMYEY VTPSGQSTHL YINGLRLEDP VTETPRSGTT ELWHVINLTG DNHPLHIHLG 480 MFQAVKMQQL VDLQAFTGCM TQLNDAVRCG VEEHAVGPVV PVPDHERTWK NVVKVPPGFV 540 TTVVVAFKLV DTNQPYPFDA TAEPGYVYHC HILDHEDNAM IRPLKLLP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10965 | PRK10965 | 0.0001 | 442 | 580 | 143 | + multicopper oxidase; Provisional | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-11 | 105 | 227 | 133 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PRK10883 | PRK10883 | 2.0e-15 | 269 | 354 | 90 | + FtsI repressor; Provisional | ||
| PRK10965 | PRK10965 | 1.0e-20 | 106 | 354 | 254 | + multicopper oxidase; Provisional | ||
| COG2132 | SufI | 6.0e-37 | 104 | 584 | 490 | + Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB21194.1 | 0 | 34 | 587 | 34 | 587 | putative spore coat protein-like protein [Oryza sativa Japonica Group] |
| GenBank | EEC69863.1 | 0 | 34 | 587 | 34 | 559 | hypothetical protein OsI_00220 [Oryza sativa Indica Group] |
| RefSeq | NP_001041895.1 | 0 | 31 | 587 | 27 | 581 | Os01g0126100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001041899.1 | 0 | 34 | 572 | 34 | 572 | Os01g0126900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002455264.1 | 0 | 1 | 588 | 1 | 588 | hypothetical protein SORBIDRAFT_03g007440 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3zdw_A | 0 | 45 | 586 | 2 | 508 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 2x88_A | 0 | 45 | 586 | 2 | 508 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 2x87_A | 0 | 45 | 586 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 2bhf_A | 0 | 45 | 586 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 1w8e_A | 0 | 45 | 586 | 2 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
