| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_25.44 |
| Family | GH35 |
| Protein Properties | Length: 671 Molecular Weight: 74015.1 Isoelectric Point: 4.5993 |
| Chromosome | Chromosome/Scaffold: 25 Start: 599879 End: 611540 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 155 | 363 | 0 |
| LDQVETWWGNLLPKVASLLYDNGGPIIMVQVENEYGSYGDDKAYLHHLVRFARQHLGEDTILYTTDGGARELLEKGTILGDAVFSAVDFPTGDEPWPIFK LQKEFNAPGTSPPLSSEFYTGWLTHWGENFAKTDDDSTAAALEKILSLNGSAVLYMAHGGTNFGFYNGANTGANESDYKPDITSYDYDAPIKESGDVDNA KFHALRKVI | |||
| Full Sequence |
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| Protein Sequence Length: 671 Download |
| MVSSCSVCCE VSSNDPEYAL ASDSDRTKAL SSSFGYQQLR SFEAFCVPET TPTTLLKDIY 60 LLLITGWEIV ILSDAQLTLP KVMECRFDFE NNRGVIEVIS QDMTMLSSIS QTCAFESDAG 120 GGTSSLELEE TSGGDDQSLP VAIGDVGSVG ISFLLDQVET WWGNLLPKVA SLLYDNGGPI 180 IMVQVENEYG SYGDDKAYLH HLVRFARQHL GEDTILYTTD GGARELLEKG TILGDAVFSA 240 VDFPTGDEPW PIFKLQKEFN APGTSPPLSS EFYTGWLTHW GENFAKTDDD STAAALEKIL 300 SLNGSAVLYM AHGGTNFGFY NGANTGANES DYKPDITSYD YDAPIKESGD VDNAKFHALR 360 KVIGQYSALP LPPVPYNNEK VGYGSVQLQK TAFLFDSINL IDPAEVVESE NPISMESAGQ 420 MFGFLLYVSE YAADKAGSSL FIPKVHDRAQ VFISCPHGNN EQRPQYVGAI ERWSNQAVGL 480 PNFKCVSNIS LFILVENLGR VNYGPHMFDR KGILSPVFLD EHVLHGWKML PIPFQNLNEV 540 PKINPVARHA YSELTKGSDC KHLEHNFSNV SNEPAFYLGH ISIDKVDLVK DTYLSFHGWG 600 KGVVFVNEFN LGRYWPVNSH VANRSRMSQP HWHEVLLELE SPNPKLVVHS VDQPDFTCGS 660 KLSSSNVHQL * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03059 | PLN03059 | 6.0e-10 | 168 | 360 | 200 | + beta-galactosidase; Provisional | ||
| COG1874 | LacA | 2.0e-14 | 163 | 615 | 490 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-76 | 155 | 366 | 212 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD28499.1 | 0 | 182 | 670 | 1 | 492 | Galactose-binding like [Medicago truncatula] |
| EMBL | CBI35958.1 | 0 | 154 | 664 | 196 | 706 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001031273.1 | 0 | 155 | 666 | 123 | 633 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002280228.1 | 0 | 154 | 664 | 172 | 682 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327549.1 | 0 | 155 | 670 | 131 | 643 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 155 | 618 | 132 | 572 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3thd_C | 0 | 155 | 618 | 132 | 572 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3thd_B | 0 | 155 | 618 | 132 | 572 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3thd_A | 0 | 155 | 618 | 132 | 572 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3thc_D | 0 | 155 | 618 | 132 | 572 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO091306 | 245 | 155 | 399 | 0 |
| EH756620 | 254 | 198 | 451 | 0 |
| CO123388 | 282 | 303 | 584 | 0 |
| EY723876 | 266 | 188 | 453 | 0 |
| CB630883 | 268 | 202 | 468 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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